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@@ -36,8 +36,8 @@ A [tibble](https://tibble.tidyverse.org/reference/tibble.html) with 78
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name of the taxon. ***This is a unique identifier.***
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- `status`
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Status of the taxon, either "accepted", "not validly published",
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"synonym", or "unknown"
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Status of the taxon, either .val accepted, .val not validly published,
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.val synonym, or .val unknown
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- `kingdom`, `phylum`, `class`, `order`, `family`, `genus`, `species`,
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`subspecies`
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@@ -59,17 +59,17 @@ A [tibble](https://tibble.tidyverse.org/reference/tibble.html) with 78
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comply with CRAN that only allows ASCII characters.
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- `oxygen_tolerance`
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Oxygen tolerance, either "aerobe", "anaerobe",
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"anaerobe/microaerophile", "facultative anaerobe", "likely facultative
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anaerobe", "microaerophile", or NA. These data were retrieved from
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BacDive (see *Source*). Items that contain "likely" are missing from
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BacDive and were extrapolated from other species within the same genus
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to guess the oxygen tolerance. Currently 68.3% of all ~39 000 bacteria
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in the data set contain an oxygen tolerance.
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Oxygen tolerance, either .val aerobe, .val anaerobe, .val
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anaerobe/microaerophile, .val facultative anaerobe, .val likely
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facultative anaerobe, .val microaerophile, or NA. These data were
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retrieved from BacDive (see *Source*). Items that contain "likely" are
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missing from BacDive and were extrapolated from other species within
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the same genus to guess the oxygen tolerance. Currently 68.3% of all
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~39 000 bacteria in the data set contain an oxygen tolerance.
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- `source`
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Either "GBIF", "LPSN", "Manually added", "MycoBank", or "manually
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added" (see *Source*)
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Either .val GBIF, .val LPSN, .val Manually added, .val MycoBank, or
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.val manually added (see *Source*)
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- `lpsn`
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Identifier ('Record number') of List of Prokaryotic names with
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