From d247365476e8d2a3933e9265a046cc12823d7ac2 Mon Sep 17 00:00:00 2001 From: github-actions <41898282+github-actions[bot]@users.noreply.github.com> Date: Fri, 16 Dec 2022 15:17:49 +0000 Subject: [PATCH] Built site for AMR: 1.8.2.9063@5f3a769 --- 404.html | 4 +- AMR_intro.png | Bin 96231 -> 100007 bytes AMR_intro.svg | 2 +- LICENSE-text.html | 4 +- articles/AMR.html | 536 +++++++++--------- .../AMR_files/figure-html/disk_plots-1.png | Bin 38060 -> 38769 bytes .../figure-html/disk_plots_mo_ab-1.png | Bin 52674 -> 56491 bytes .../AMR_files/figure-html/mic_plots-1.png | Bin 27972 -> 27552 bytes .../AMR_files/figure-html/mic_plots-2.png | Bin 37180 -> 41140 bytes .../figure-html/mic_plots_mo_ab-1.png | Bin 37747 -> 37965 bytes .../figure-html/mic_plots_mo_ab-2.png | Bin 51941 -> 51360 bytes articles/AMR_files/figure-html/plot 1-1.png | Bin 43030 -> 42681 bytes articles/AMR_files/figure-html/plot 3-1.png | Bin 28452 -> 28468 bytes articles/AMR_files/figure-html/plot 4-1.png | Bin 78100 -> 78078 bytes articles/AMR_files/figure-html/plot 5-1.png | Bin 49885 -> 49903 bytes articles/EUCAST.html | 4 +- articles/MDR.html | 54 +- articles/PCA.html | 4 +- articles/SPSS.html | 6 +- articles/WHONET.html | 4 +- articles/datasets.html | 56 +- articles/index.html | 4 +- articles/resistance_predict.html | 4 +- articles/welcome_to_AMR.html | 6 +- authors.html | 4 +- index.html | 6 +- news/index.html | 114 ++-- pkgdown.yml | 4 +- reference/AMR-deprecated.html | 4 +- reference/AMR.html | 10 +- reference/Rplot005.png | Bin 13132 -> 13189 bytes reference/Rplot006.png | Bin 12653 -> 12713 bytes reference/Rplot007.png | Bin 13643 -> 13096 bytes reference/Rplot008.png | Bin 18009 -> 18076 bytes reference/Rplot009.png | Bin 8071 -> 8616 bytes reference/WHOCC.html | 4 +- reference/WHONET.html | 4 +- reference/ab_from_text.html | 4 +- reference/ab_property.html | 4 +- reference/add_custom_antimicrobials.html | 4 +- reference/age.html | 24 +- reference/age_groups.html | 4 +- reference/antibiotic_class_selectors.html | 4 +- reference/antibiotics.html | 4 +- reference/as.ab.html | 4 +- reference/as.av.html | 4 +- reference/as.disk.html | 4 +- reference/as.mic.html | 4 +- reference/as.mo.html | 4 +- reference/as.rsi.html | 24 +- reference/atc_online.html | 4 +- reference/av_from_text.html | 4 +- reference/av_property.html | 4 +- reference/availability.html | 4 +- reference/bug_drug_combinations.html | 4 +- reference/count.html | 4 +- reference/custom_eucast_rules.html | 4 +- reference/dosage.html | 4 +- reference/eucast_rules.html | 4 +- reference/example_isolates.html | 4 +- reference/example_isolates_unclean.html | 4 +- reference/first_isolate.html | 4 +- reference/g.test.html | 4 +- reference/get_episode.html | 126 ++-- reference/ggplot_pca.html | 4 +- reference/ggplot_rsi.html | 4 +- reference/guess_ab_col.html | 4 +- reference/index.html | 8 +- reference/intrinsic_resistant.html | 34 +- reference/italicise_taxonomy.html | 4 +- reference/join.html | 4 +- reference/key_antimicrobials.html | 4 +- reference/kurtosis.html | 8 +- reference/like.html | 4 +- reference/mdro.html | 4 +- reference/mean_amr_distance.html | 75 ++- reference/microorganisms.codes.html | 12 +- reference/microorganisms.html | 26 +- reference/mo_matching_score.html | 4 +- reference/mo_property.html | 4 +- reference/mo_source.html | 4 +- reference/pca.html | 4 +- reference/plot-1.png | Bin 27247 -> 26929 bytes reference/plot-2.png | Bin 26492 -> 26489 bytes reference/plot-3.png | Bin 28156 -> 28086 bytes reference/plot-4.png | Bin 39054 -> 38883 bytes reference/plot-5.png | Bin 38191 -> 38177 bytes reference/plot-6.png | Bin 36898 -> 36896 bytes reference/plot-7.png | Bin 38133 -> 36097 bytes reference/plot-8.png | Bin 54611 -> 54853 bytes reference/plot-9.png | Bin 24638 -> 26353 bytes reference/plot.html | 4 +- reference/proportion.html | 4 +- reference/random.html | 36 +- reference/resistance_predict.html | 4 +- reference/rsi_translation.html | 4 +- reference/skewness.html | 6 +- reference/translate.html | 4 +- search.json | 2 +- whonet.png | Bin 57266 -> 0 bytes 100 files changed, 687 insertions(+), 696 deletions(-) delete mode 100755 whonet.png diff --git a/404.html b/404.html index 043cb5da3..dd91990f4 100644 --- a/404.html +++ b/404.html @@ -17,7 +17,7 @@ - + @@ -36,7 +36,7 @@ AMR (for R) - 1.8.2.9062 + 1.8.2.9063