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(v2.1.1.9289) unit test fix

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dr. M.S. (Matthijs) Berends
2025-06-01 16:00:12 +02:00
parent 46f80b1378
commit d384b492cf
6 changed files with 17 additions and 4 deletions
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R/mdro.R
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@ -1490,7 +1490,7 @@ mdro <- function(x = NULL,
if (length(ESBLs) > 0) {
trans_tbl(
2, # positive, unconfirmed
rows = which(x$order == "Enterobacterales" & x[[ESBLs[1]]] == "R" & x[[ESBLs[2]]] == "R" & is.na(esbl)),
rows = which(x$order == "Enterobacterales" & col_values(x, ESBLs[1]) == "R" & col_values(x, ESBLs[2]) == "R" & is.na(esbl)),
cols = c(AMX %or% AMP, cephalosporins_3rd),
any_all = "all",
reason = "Enterobacterales: potential ESBL"