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(v1.4.0.9013) is_gram_negative/positive update

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dr. M.S. (Matthijs) Berends
2020-11-09 13:07:02 +01:00
parent 423879c034
commit d3b1d33210
22 changed files with 149 additions and 82 deletions
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man/as.mo.Rd
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@ -31,7 +31,7 @@ mo_renamed()
\arguments{
\item{x}{a character vector or a \link{data.frame} with one or two columns}
\item{Becker}{a logical to indicate whether \emph{Staphylococci} should be categorised into coagulase-negative \emph{Staphylococci} ("CoNS") and coagulase-positive \emph{Staphylococci} ("CoPS") instead of their own species, according to Karsten Becker \emph{et al.} (1,2,3).
\item{Becker}{a logical to indicate whether staphylococci should be categorised into coagulase-negative staphylococci ("CoNS") and coagulase-positive staphylococci ("CoPS") instead of their own species, according to Karsten Becker \emph{et al.} (1,2,3).
This excludes \emph{Staphylococcus aureus} at default, use \code{Becker = "all"} to also categorise \emph{S. aureus} as "CoPS".}