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2026-03-24 12:34:17 +00:00
parent 330f1a9dfe
commit d55d073ae9
109 changed files with 762 additions and 777 deletions

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@@ -297,7 +297,7 @@ susceptible isolates.
``` r
out <- mdro(example_isolates)
#> Warning: in `?mdro()`: NA introduced for isolates where the available percentage of
#> Warning: in `mdro()`: NA introduced for isolates where the available percentage of
#> antimicrobial classes was below 50% (set with `pct_required_classes`)
str(out)
#> Ord.factor w/ 4 levels "Negative"<"Multi-drug-resistant (MDR)"<..: NA NA 1 1 1 1 NA NA 1 1 ...
@@ -324,7 +324,7 @@ if (require("dplyr")) {
#> Warning: There was 1 warning in `mutate()`.
#> In argument: `MDRO = mdro()`.
#> Caused by warning:
#> ! in `?mdro()`: NA introduced for isolates where the available percentage of
#> ! in `mdro()`: NA introduced for isolates where the available percentage of
#> antimicrobial classes was below 50% (set with `pct_required_classes`)
#> # A tibble: 3 × 2
#> MDRO n