From d65eb144db36cc3571b6ba8a3222d939d4a38c1e Mon Sep 17 00:00:00 2001 From: github-actions <41898282+github-actions[bot]@users.noreply.github.com> Date: Sun, 3 Dec 2023 15:57:17 +0000 Subject: [PATCH] Built site for AMR: 2.1.1.9003@7059568 --- 404.html | 2 +- LICENSE-text.html | 2 +- articles/AMR.html | 2 +- articles/EUCAST.html | 2 +- articles/MDR.html | 58 +++++------ articles/PCA.html | 2 +- articles/WHONET.html | 2 +- articles/datasets.html | 2 +- articles/index.html | 2 +- articles/other_pkg.html | 2 +- articles/resistance_predict.html | 2 +- articles/welcome_to_AMR.html | 2 +- authors.html | 2 +- index.html | 2 +- news/index.html | 15 ++- pkgdown.yml | 2 +- reference/AMR-options.html | 2 +- reference/AMR.html | 2 +- reference/Rplot005.png | Bin 13425 -> 13456 bytes reference/Rplot006.png | Bin 13094 -> 13130 bytes reference/Rplot008.png | Bin 8151 -> 9362 bytes reference/Rplot009.png | Bin 9553 -> 10271 bytes reference/Rplot010.png | Bin 8467 -> 9577 bytes reference/Rplot011.png | Bin 12989 -> 13454 bytes reference/Rplot012.png | Bin 20243 -> 20264 bytes reference/Rplot013.png | Bin 8534 -> 8483 bytes reference/WHOCC.html | 2 +- reference/WHONET.html | 2 +- reference/ab_from_text.html | 2 +- reference/ab_property.html | 2 +- reference/add_custom_antimicrobials.html | 2 +- reference/add_custom_microorganisms.html | 2 +- reference/age.html | 22 ++-- reference/age_groups.html | 2 +- reference/antibiogram.html | 2 +- reference/antibiotic_class_selectors.html | 12 +-- reference/antibiotics.html | 2 +- reference/as.ab.html | 2 +- reference/as.av.html | 2 +- reference/as.disk.html | 2 +- reference/as.mic.html | 2 +- reference/as.mo.html | 2 +- reference/as.sir.html | 28 +++--- reference/atc_online.html | 2 +- reference/av_from_text.html | 2 +- reference/av_property.html | 2 +- reference/availability.html | 2 +- reference/bug_drug_combinations.html | 2 +- reference/clinical_breakpoints.html | 2 +- reference/count.html | 2 +- reference/custom_eucast_rules.html | 2 +- reference/dosage.html | 2 +- reference/eucast_rules.html | 2 +- reference/example_isolates.html | 2 +- reference/example_isolates_unclean.html | 2 +- reference/first_isolate.html | 2 +- reference/g.test.html | 2 +- reference/get_episode.html | 116 +++++++++++----------- reference/ggplot_pca.html | 2 +- reference/ggplot_sir.html | 2 +- reference/guess_ab_col.html | 2 +- reference/index.html | 2 +- reference/intrinsic_resistant.html | 2 +- reference/italicise_taxonomy.html | 2 +- reference/join.html | 2 +- reference/key_antimicrobials.html | 2 +- reference/kurtosis.html | 6 +- reference/like.html | 2 +- reference/mdro.html | 2 +- reference/mean_amr_distance.html | 72 +++++++------- reference/microorganisms.codes.html | 2 +- reference/microorganisms.groups.html | 2 +- reference/microorganisms.html | 2 +- reference/mo_matching_score.html | 2 +- reference/mo_property.html | 2 +- reference/mo_source.html | 2 +- reference/pca.html | 2 +- reference/plot-1.png | Bin 26875 -> 27286 bytes reference/plot-10.png | Bin 25381 -> 27660 bytes reference/plot-11.png | Bin 35507 -> 37955 bytes reference/plot-12.png | Bin 60264 -> 60234 bytes reference/plot-13.png | Bin 26123 -> 26160 bytes reference/plot-2.png | Bin 26396 -> 26421 bytes reference/plot-3.png | Bin 27742 -> 28142 bytes reference/plot-4.png | Bin 40843 -> 41063 bytes reference/plot-5.png | Bin 40160 -> 40180 bytes reference/plot-6.png | Bin 38474 -> 38499 bytes reference/plot-8.png | Bin 25035 -> 27081 bytes reference/plot-9.png | Bin 28236 -> 30546 bytes reference/plot.html | 14 ++- reference/proportion.html | 2 +- reference/random.html | 34 +++---- reference/resistance_predict.html | 2 +- reference/skewness.html | 4 +- reference/translate.html | 2 +- search.json | 2 +- 96 files changed, 259 insertions(+), 252 deletions(-) diff --git a/404.html b/404.html index 1f2050ec..8bcd3f5d 100644 --- a/404.html +++ b/404.html @@ -36,7 +36,7 @@ AMR (for R) - 2.1.1.9002 + 2.1.1.9003