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(v2.1.1.9118) move ggplot2 plotting functions to general 'plotting' man page
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@ -1,9 +1,9 @@
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Metadata-Version: 2.1
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Name: AMR
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Version: 2.1.1.9117
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Version: 2.1.1.9118
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Summary: A Python wrapper for the AMR R package
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Home-page: https://github.com/msberends/AMR
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Author: Dr. Matthijs Berends
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Author: Matthijs Berends
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Author-email: m.s.berends@umcg.nl
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License: GPL 2
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Project-URL: Bug Tracker, https://github.com/msberends/AMR/issues
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@ -117,8 +117,6 @@ from .functions import is_new_episode
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from .functions import ggplot_pca
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from .functions import ggplot_sir
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from .functions import geom_sir
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from .functions import theme_sir
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from .functions import labels_sir_count
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from .functions import guess_ab_col
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from .functions import italicise_taxonomy
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from .functions import italicize_taxonomy
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@ -181,6 +179,8 @@ from .functions import mo_info
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from .functions import mo_url
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from .functions import mo_property
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from .functions import pca
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from .functions import theme_sir
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from .functions import labels_sir_count
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from .functions import resistance
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from .functions import susceptibility
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from .functions import sir_confidence_interval
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@ -381,12 +381,6 @@ def ggplot_sir(*args, **kwargs):
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def geom_sir(*args, **kwargs):
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"""See our website of the R package for the manual: https://msberends.github.io/AMR/index.html"""
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return convert_to_python(amr_r.geom_sir(*args, **kwargs))
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def theme_sir(*args, **kwargs):
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"""See our website of the R package for the manual: https://msberends.github.io/AMR/index.html"""
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return convert_to_python(amr_r.theme_sir(*args, **kwargs))
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def labels_sir_count(*args, **kwargs):
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"""See our website of the R package for the manual: https://msberends.github.io/AMR/index.html"""
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return convert_to_python(amr_r.labels_sir_count(*args, **kwargs))
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def guess_ab_col(*args, **kwargs):
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"""See our website of the R package for the manual: https://msberends.github.io/AMR/index.html"""
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return convert_to_python(amr_r.guess_ab_col(*args, **kwargs))
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@ -573,6 +567,12 @@ def mo_property(*args, **kwargs):
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def pca(*args, **kwargs):
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"""See our website of the R package for the manual: https://msberends.github.io/AMR/index.html"""
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return convert_to_python(amr_r.pca(*args, **kwargs))
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def theme_sir(*args, **kwargs):
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"""See our website of the R package for the manual: https://msberends.github.io/AMR/index.html"""
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return convert_to_python(amr_r.theme_sir(*args, **kwargs))
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def labels_sir_count(*args, **kwargs):
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"""See our website of the R package for the manual: https://msberends.github.io/AMR/index.html"""
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return convert_to_python(amr_r.labels_sir_count(*args, **kwargs))
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def resistance(*args, **kwargs):
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"""See our website of the R package for the manual: https://msberends.github.io/AMR/index.html"""
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return convert_to_python(amr_r.resistance(*args, **kwargs))
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@ -2,14 +2,14 @@ from setuptools import setup, find_packages
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setup(
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name='AMR',
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version='2.1.1.9117',
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version='2.1.1.9118',
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packages=find_packages(),
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install_requires=[
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'rpy2',
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'numpy',
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'pandas',
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],
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author='Dr. Matthijs Berends',
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author='Matthijs Berends',
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author_email='m.s.berends@umcg.nl',
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description='A Python wrapper for the AMR R package',
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long_description=open('README.md').read(),
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