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Version 2.0 on CRAN

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dr. M.S. (Matthijs) Berends 2023-03-12 14:07:45 +01:00
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CRAN-SUBMISSION
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Version: 1.8.2 Version: 2.0.0
Date: 2022-09-27 12:18:42 UTC Date: 2023-03-12 12:42:08 UTC
SHA: ccb09706e4f168ab6133de3d2294bcaeed0d3fc8 SHA: 80cfc503c29ad48806e526b97d4570600bbd5420

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DESCRIPTION
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Package: AMR Package: AMR
Version: 1.8.2.9152 Version: 2.0.0
Date: 2023-03-12 Date: 2023-03-12
Title: Antimicrobial Resistance Data Analysis Title: Antimicrobial Resistance Data Analysis
Description: Functions to simplify and standardise antimicrobial resistance (AMR) Description: Functions to simplify and standardise antimicrobial resistance (AMR)

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NEWS.md
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# AMR 1.8.2.9152 # AMR 2.0.0
This is a new major release of the AMR package, with great new additions but also some breaking changes for current users. These are all listed below. This is a new major release of the AMR package, with great new additions but also some breaking changes for current users. These are all listed below.

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cran-comments.md
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Extra release for fixing image options, as requested by CRAN team on 17 February 2022 (Kurt Hornik). As with all previous >20 releases, some CHECKs might return a NOTE for *just* hitting the installation size limit, though its size has been brought down to a minimum in collaboration with CRAN maintainers previously.
We consider this a high-impact package: it was published in the Journal of Statistical Software (2022), is including in a CRAN Task View (Epidemiology), and is according to download stats used in almost all countries in the world. If there is anything to note, please let us know up-front without directly archiving the current version. That said, we continually unit test our package extensively and have no reason to assume that anything is wrong.
Thanks for maintaining and hosting CRAN! It's empowering R and its use enormously!

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vignettes/welcome_to_AMR.Rmd
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All reference data sets (about microorganisms, antibiotics, SIR interpretation, EUCAST rules, etc.) in this `AMR` package are publicly and freely available. We continually export our data sets to formats for use in R, SPSS, SAS, Stata and Excel. We also supply flat files that are machine-readable and suitable for input in any software program, such as laboratory information systems. Please find [all download links on our website](https://msberends.github.io/AMR/articles/datasets.html), which is automatically updated with every code change. All reference data sets (about microorganisms, antibiotics, SIR interpretation, EUCAST rules, etc.) in this `AMR` package are publicly and freely available. We continually export our data sets to formats for use in R, SPSS, SAS, Stata and Excel. We also supply flat files that are machine-readable and suitable for input in any software program, such as laboratory information systems. Please find [all download links on our website](https://msberends.github.io/AMR/articles/datasets.html), which is automatically updated with every code change.
This R package was created for both routine data analysis and academic research at the Faculty of Medical Sciences of the [University of Groningen](https://www.rug.nl), in collaboration with non-profit organisations [Certe Medical Diagnostics and Advice Foundation](https://www.certe.nl) and [University Medical Center Groningen](https://www.umcg.nl), and is being [actively and durably maintained](https://msberends.github.io/AMR/news) by two public healthcare organisations in the Netherlands. This R package was created for both routine data analysis and academic research at the Faculty of Medical Sciences of the [University of Groningen](https://www.rug.nl), in collaboration with non-profit organisations [Certe Medical Diagnostics and Advice Foundation](https://www.certe.nl) and [University Medical Center Groningen](https://www.umcg.nl), and is being [actively and durably maintained](https://msberends.github.io/AMR/news/) by two public healthcare organisations in the Netherlands.
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