From dfdd7a09689c7e15c4c1d1daf4941af7b1b0615d Mon Sep 17 00:00:00 2001 From: "Matthijs S. Berends" Date: Tue, 27 Sep 2022 12:18:16 +0200 Subject: [PATCH] fixes --- .github/prehooks/pre-commit | 3 ++- DESCRIPTION | 2 +- NAMESPACE | 1 + NEWS.md | 2 +- 4 files changed, 5 insertions(+), 3 deletions(-) diff --git a/.github/prehooks/pre-commit b/.github/prehooks/pre-commit index a425076f7..d35cdff5a 100755 --- a/.github/prehooks/pre-commit +++ b/.github/prehooks/pre-commit @@ -7,10 +7,11 @@ if command -v Rscript > /dev/null; then if [ "$(Rscript -e 'cat(all(c('"'pkgload'"', '"'devtools'"', '"'dplyr'"', '"'styler'"') %in% rownames(installed.packages())))')" = "TRUE" ]; then Rscript -e "source('data-raw/_pre_commit_hook.R')" currentpkg=`Rscript -e "cat(pkgload::pkg_name())"` - echo "-> Adding 'R/sysdata.rda' and all files in folders 'data-raw' and 'man' to this commit" + echo "-> Adding all files in 'data-raw' to this commit" git add data-raw/* git add man/* git add R/sysdata.rda + git add NAMESPACE else echo "- R package 'pkgload', 'devtools', 'dplyr', or 'styler' not installed!" currentpkg="your" diff --git a/DESCRIPTION b/DESCRIPTION index dc3b576f7..7f614924a 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -1,5 +1,5 @@ Package: AMR -Version: 1.8.1.9069 +Version: 1.8.1.9070 Date: 2022-09-27 Title: Antimicrobial Resistance Data Analysis Description: Functions to simplify and standardise antimicrobial resistance (AMR) diff --git a/NAMESPACE b/NAMESPACE index ab9c2d8ff..7a3534000 100755 --- a/NAMESPACE +++ b/NAMESPACE @@ -289,6 +289,7 @@ export(mo_reset_session) export(mo_shortname) export(mo_snomed) export(mo_species) +export(mo_status) export(mo_subspecies) export(mo_synonyms) export(mo_taxonomy) diff --git a/NEWS.md b/NEWS.md index f080b4c47..557c9a9ef 100755 --- a/NEWS.md +++ b/NEWS.md @@ -1,4 +1,4 @@ -# AMR 1.8.1.9069 +# AMR 1.8.1.9070 This version will eventually become v2.0! We're happy to reach a new major milestone soon!