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website update
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.github/prehooks/pre-commit
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.github/prehooks/pre-commit
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@ -5,7 +5,7 @@ echo "Running pre-commit hook..."
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# ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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# ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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echo ">> Updating R documentation..."
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echo ">> Updating R documentation..."
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if command -v Rscript > /dev/null; then
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if command -v Rscript > /dev/null; then
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if [[ "$(Rscript -e 'cat(all(c('"'roxygen2'"', '"'pkgload'"') %in% rownames(installed.packages())))')" == "TRUE" ]]; then
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if "$(Rscript -e 'cat(all(c('"'roxygen2'"', '"'pkgload'"') %in% rownames(installed.packages())))')" == "TRUE"; then
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Rscript -e "suppressMessages(roxygen2::roxygenise())"
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Rscript -e "suppressMessages(roxygen2::roxygenise())"
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currentpkg=`Rscript -e "cat(pkgload::pkg_name())"`
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currentpkg=`Rscript -e "cat(pkgload::pkg_name())"`
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git add man/*
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git add man/*
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@ -1,5 +1,5 @@
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Package: AMR
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Package: AMR
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Version: 1.8.1.9025
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Version: 1.8.1.9026
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Date: 2022-08-25
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Date: 2022-08-25
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Title: Antimicrobial Resistance Data Analysis
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Title: Antimicrobial Resistance Data Analysis
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Description: Functions to simplify and standardise antimicrobial resistance (AMR)
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Description: Functions to simplify and standardise antimicrobial resistance (AMR)
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2
NEWS.md
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NEWS.md
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# your 1.8.1.9025
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# your 1.8.1.9026
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### New
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### New
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* EUCAST 2022 and CLSI 2022 guidelines have been added for `as.rsi()`. EUCAST 2022 is now the new default guideline for all MIC and disks diffusion interpretations.
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* EUCAST 2022 and CLSI 2022 guidelines have been added for `as.rsi()`. EUCAST 2022 is now the new default guideline for all MIC and disks diffusion interpretations.
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