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mirror of https://github.com/msberends/AMR.git synced 2026-03-11 15:47:54 +01:00

(v3.0.1.9030) fix R 3.6

This commit is contained in:
2026-03-07 18:07:24 +01:00
parent 9af726dcaa
commit e2102c081a
4 changed files with 8 additions and 5 deletions

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@@ -1,5 +1,5 @@
Package: AMR
Version: 3.0.1.9029
Version: 3.0.1.9030
Date: 2026-03-07
Title: Antimicrobial Resistance Data Analysis
Description: Functions to simplify and standardise antimicrobial resistance (AMR)

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@@ -1,4 +1,4 @@
# AMR 3.0.1.9029
# AMR 3.0.1.9030
### New
* Integration with the **tidymodels** framework to allow seamless use of SIR, MIC and disk data in modelling pipelines via `recipes`

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@@ -35,7 +35,10 @@ test_that("test-data.R", {
expect_identical(class(microorganisms$mo), c("mo", "character"))
expect_identical(nrow(antimicrobials), length(unique(AMR::antimicrobials$ab)))
expect_identical(class(AMR::antimicrobials$ab), c("ab", "character"))
expect_identical(nrow(antimicrobials[!is.na(antimicrobials$cid), ]), length(unique(AMR::antimicrobials$cid[!is.na(antimicrobials$cid)])), label = "nr of rows with CIDs", expected.label = "unique nr of CIDs")
expect_identical(
nrow(antimicrobials[!is.na(antimicrobials$cid), ]),
length(unique(AMR::antimicrobials$cid[!is.na(antimicrobials$cid)]))
)
# check cross table reference
expect_true(all(microorganisms.codes$mo %in% microorganisms$mo))