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mirror of https://github.com/msberends/AMR.git synced 2025-07-08 11:51:59 +02:00

fix for R < 3.4

This commit is contained in:
2022-12-30 12:57:27 +01:00
parent 1db74e86cd
commit e4ea96cbf9
8 changed files with 25 additions and 24 deletions

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@ -96,13 +96,13 @@ navbar:
- text: "Apply EUCAST rules"
icon: "fa-exchange-alt"
href: "articles/EUCAST.html"
- text: "Get properties of a microorganism"
- text: "Get taxonomy of a microorganism"
icon: "fa-bug"
href: "reference/mo_property.html" # reference instead of an article
- text: "Get properties of an antibiotic"
- text: "Get properties of an antibiotic drug"
icon: "fa-capsules"
href: "reference/ab_property.html" # reference instead of an article
- text: "Get properties of an antiviral agent"
- text: "Get properties of an antiviral drug"
icon: "fa-capsules"
href: "reference/av_property.html" # reference instead of an article
- text: "Manual"
@ -118,15 +118,14 @@ navbar:
- text: "Source Code"
icon: "fab fa-github"
href: "https://github.com/msberends/AMR"
# - text: "Survey"
# icon: "fa-clipboard-list"
# href: "survey.html"
reference:
- title: "Preparing data: microorganisms"
desc: >
These functions are meant to get taxonomically valid properties of microorganisms from any input.
Use `mo_source()` to teach this package how to translate your own codes to valid microorganism codes.
These functions are meant to get taxonomically valid properties of microorganisms from any input, but
also properties derived from taxonomy, such as the Gram stain (`mo_gramstain()`) , or `mo_is_yeast()`.
Use `mo_source()` to teach this package how to translate your own codes to valid microorganisms, and
use `add_custom_microorganisms() to add your own custom microorganisms to this package.
contents:
- "`as.mo`"
- "`mo_property`"