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(v1.6.0.9065) unit tests

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This commit is contained in:
dr. M.S. (Matthijs) Berends
2021-05-24 11:01:32 +02:00
parent 4fbf9e1720
commit e5599bc694
22 changed files with 126 additions and 133 deletions
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9
inst/tinytest/test-proportion.R
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@ -88,14 +88,12 @@ if (AMR:::pkg_is_available("dplyr")) {
example_isolates$AMX %>% proportion_R())
)
}
AMR:::reset_all_thrown_messages()
expect_warning(proportion_R(as.character(example_isolates$AMC)))
AMR:::reset_all_thrown_messages()
expect_warning(proportion_S(as.character(example_isolates$AMC)))
AMR:::reset_all_thrown_messages()
expect_warning(proportion_S(as.character(example_isolates$AMC,
example_isolates$GEN)))
AMR:::reset_all_thrown_messages()
expect_warning(n_rsi(as.character(example_isolates$AMC,
example_isolates$GEN)))
expect_equal(suppressWarnings(n_rsi(as.character(example_isolates$AMC,
@ -120,11 +118,8 @@ expect_identical(suppressWarnings(proportion_S(example_isolates$AMX, minimum = n
NA_real_)
# warning for speed loss
AMR:::reset_all_thrown_messages()
expect_warning(proportion_R(as.character(example_isolates$GEN)))
AMR:::reset_all_thrown_messages()
expect_warning(proportion_I(as.character(example_isolates$GEN)))
AMR:::reset_all_thrown_messages()
expect_warning(proportion_S(example_isolates$AMC, as.character(example_isolates$GEN)))
expect_error(proportion_df(c("A", "B", "C")))
expect_error(proportion_df(example_isolates[, "date"]))