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(v2.1.1.9286) deprecate antibiotics better, add ATC for ceftaroline

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dr. M.S. (Matthijs) Berends
2025-06-01 11:54:40 +02:00
parent 80f08f91da
commit e70f3de02e
17 changed files with 66 additions and 23 deletions
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8
R/zzz.R
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@ -110,14 +110,6 @@ AMR_env$cross_icon <- if (isTRUE(base::l10n_info()$`UTF-8`)) "\u00d7" else "x"
AB_LOOKUP <- create_AB_AV_lookup(AMR::antimicrobials)
}
# deprecated antibiotics data set
makeActiveBinding("antibiotics", function() {
if (interactive()) {
deprecation_warning(old = "antibiotics", new = "antimicrobials", is_dataset = TRUE)
}
AMR::antimicrobials
}, env = asNamespace(pkgname))
AMR_env$AB_lookup <- cbind(AMR::antimicrobials, AB_LOOKUP)
AMR_env$AV_lookup <- cbind(AMR::antivirals, AV_LOOKUP)
}