mirror of
https://github.com/msberends/AMR.git
synced 2025-07-10 16:22:10 +02:00
Built site for AMR: 1.8.2.9084@86e28ba
This commit is contained in:
github-actions
@ -10,7 +10,7 @@
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">1.8.2.9083</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">1.8.2.9084</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
@ -183,42 +183,43 @@
|
||||
<h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2>
|
||||
<div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="fu">random_mic</span><span class="op">(</span><span class="fl">25</span><span class="op">)</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'mic'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 0.0625 0.0625 0.0625 1 0.002 16 128 0.5 0.5 64 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [11] 256 4 0.25 0.0625 0.0625 8 0.01 0.25 0.0625 0.005 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [21] 32 0.125 0.25 128 0.5 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 4 16 1 1 128 0.125 0.5 32 8 2 0.005 >=256</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [13] 0.005 32 0.025 >=256 >=256 16 64 2 0.001 16 16 0.025</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [25] >=256</span>
|
||||
<span class="r-in"><span><span class="fu">random_disk</span><span class="op">(</span><span class="fl">25</span><span class="op">)</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'disk'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 50 28 50 33 47 18 38 25 7 49 43 34 26 27 45 40 42 17 22 42 41 25 31 45 29</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 26 29 39 47 43 15 17 40 11 45 41 48 28 25 46 49 36 44 46 13 11 26 29 47 36</span>
|
||||
<span class="r-in"><span><span class="fu">random_rsi</span><span class="op">(</span><span class="fl">25</span><span class="op">)</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'rsi'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] S R I R R S S I S I S S S S I I I S S I S R I R I</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] R S I I R S I S R R I R R I R S R S R R R S I R R</span>
|
||||
<span class="r-in"><span></span></span>
|
||||
<span class="r-in"><span><span class="co"># \donttest{</span></span></span>
|
||||
<span class="r-in"><span><span class="co"># make the random generation more realistic by setting a bug and/or drug:</span></span></span>
|
||||
<span class="r-in"><span><span class="fu">random_mic</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Klebsiella pneumoniae"</span><span class="op">)</span> <span class="co"># range 0.0625-64</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'mic'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 0.025 16 2 16 2 <=0.002 >=64 0.005 4 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [10] 8 0.25 0.025 0.0625 >=64 >=64 4 0.0625 16 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [19] 4 4 32 32 >=64 8 4 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 4 16 4 0.001 >=256 0.25 0.25 8 0.001 0.002 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [11] 2 2 1 0.25 0.25 64 0.125 8 0.0625 64 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [21] 4 0.5 0.5 0.01 0.5 </span>
|
||||
<span class="r-in"><span><span class="fu">random_mic</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Klebsiella pneumoniae"</span>, <span class="st">"meropenem"</span><span class="op">)</span> <span class="co"># range 0.0625-16</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'mic'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 2 4 1 8 4 2 4 >=16 2 >=16 1 8 2 >=16 8 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [16] 2 >=16 2 2 8 1 2 1 1 4 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 4 <=0.5 >=32 8 2 16 <=0.5 8 16 1 4 1 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [13] 8 <=0.5 1 8 8 1 4 <=0.5 8 2 2 2 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [25] 2 </span>
|
||||
<span class="r-in"><span><span class="fu">random_mic</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Streptococcus pneumoniae"</span>, <span class="st">"meropenem"</span><span class="op">)</span> <span class="co"># range 0.0625-4</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'mic'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 0.0625 0.0625 0.25 0.0625 8 2 <=0.025 2 >=16 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [10] 2 <=0.025 >=16 1 0.0625 0.125 1 1 1 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [19] 4 8 0.5 0.5 4 2 0.5 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 4 0.0625 0.5 1 0.25 0.25 4 0.0625 2 4 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [11] 0.0625 0.5 0.5 4 0.125 0.0625 1 0.25 1 0.5 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [21] 0.25 1 0.125 1 1 </span>
|
||||
<span class="r-in"><span></span></span>
|
||||
<span class="r-in"><span><span class="fu">random_disk</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Klebsiella pneumoniae"</span><span class="op">)</span> <span class="co"># range 8-50</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'disk'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 41 24 50 49 30 49 31 45 21 40 45 31 17 31 49 31 12 40 50 19 26 8 41 24 47</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 12 47 48 45 12 36 36 14 49 39 42 38 45 47 47 42 46 50 25 50 9 42 50 41 28</span>
|
||||
<span class="r-in"><span><span class="fu">random_disk</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Klebsiella pneumoniae"</span>, <span class="st">"ampicillin"</span><span class="op">)</span> <span class="co"># range 11-17</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'disk'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 15 16 16 12 12 16 17 11 11 12 14 12 11 12 15 17 16 17 17 12 17 13 17 15 16</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 15 12 11 15 16 17 12 11 14 11 11 15 12 17 11 13 12 17 16 14 15 17 16 12 11</span>
|
||||
<span class="r-in"><span><span class="fu">random_disk</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Streptococcus pneumoniae"</span>, <span class="st">"ampicillin"</span><span class="op">)</span> <span class="co"># range 12-27</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'disk'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 22 15 20 16 22 26 25 25 19 27 17 22 20 19 19 23 16 16 18 19 19 21 19 15 25</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 25 18 23 25 25 21 19 15 24 20 19 24 20 18 17 26 20 17 21 16 15 25 27 25 22</span>
|
||||
<span class="r-in"><span><span class="co"># }</span></span></span>
|
||||
</code></pre></div>
|
||||
</div>
|
||||
|
||||
Reference in New Issue
Block a user