From e9c6e5e2e96f8bc187f3e1be6f7ea8c814a73dc5 Mon Sep 17 00:00:00 2001 From: github-actions <41898282+github-actions[bot]@users.noreply.github.com> Date: Sat, 26 Apr 2025 14:42:58 +0000 Subject: [PATCH] Built site for AMR@2.1.1.9255: d166aa2 --- 404.html | 2 +- LICENSE-text.html | 2 +- articles/AMR.html | 8 +- articles/AMR_for_Python.html | 2 +- articles/AMR_with_tidymodels.html | 2 +- articles/EUCAST.html | 2 +- articles/MDR.html | 2 +- articles/PCA.html | 2 +- articles/WHONET.html | 2 +- articles/datasets.html | 10 +- articles/index.html | 2 +- articles/welcome_to_AMR.html | 2 +- authors.html | 2 +- index.html | 4 +- news/index.html | 16 +- pkgdown.yml | 2 +- reference/AMR-deprecated.html | 2 +- reference/AMR-options.html | 2 +- reference/AMR.html | 2 +- reference/WHOCC.html | 2 +- reference/WHONET.html | 2 +- reference/ab_from_text.html | 2 +- reference/ab_property.html | 2 +- reference/add_custom_antimicrobials.html | 4 +- reference/add_custom_microorganisms.html | 2 +- reference/age.html | 2 +- reference/age_groups.html | 2 +- reference/antibiogram.html | 2 +- reference/antimicrobial_selectors.html | 2 +- reference/antimicrobials.html | 2 +- reference/as.ab.html | 4 +- reference/as.av.html | 2 +- reference/as.disk.html | 27 +- reference/as.mic-2.png | Bin 0 -> 34759 bytes reference/as.mic-3.png | Bin 0 -> 52488 bytes reference/as.mic-4.png | Bin 0 -> 50804 bytes reference/as.mic.html | 24 +- reference/as.mo.html | 2 +- reference/as.sir.html | 348 ++++++----------------- reference/atc_online.html | 2 +- reference/av_from_text.html | 2 +- reference/av_property.html | 2 +- reference/availability.html | 2 +- reference/bug_drug_combinations.html | 2 +- reference/clinical_breakpoints.html | 2 +- reference/count.html | 2 +- reference/custom_eucast_rules.html | 2 +- reference/dosage.html | 2 +- reference/eucast_rules.html | 2 +- reference/example_isolates.html | 2 +- reference/example_isolates_unclean.html | 2 +- reference/export_ncbi_biosample.html | 2 +- reference/first_isolate.html | 2 +- reference/g.test.html | 2 +- reference/get_episode.html | 2 +- reference/ggplot_pca.html | 2 +- reference/ggplot_sir.html | 2 +- reference/guess_ab_col.html | 2 +- reference/index.html | 2 +- reference/intrinsic_resistant.html | 2 +- reference/italicise_taxonomy.html | 2 +- reference/join.html | 2 +- reference/key_antimicrobials.html | 2 +- reference/kurtosis.html | 2 +- reference/like.html | 2 +- reference/mdro.html | 2 +- reference/mean_amr_distance.html | 2 +- reference/microorganisms.codes.html | 2 +- reference/microorganisms.groups.html | 2 +- reference/microorganisms.html | 2 +- reference/mo_matching_score.html | 2 +- reference/mo_property.html | 2 +- reference/mo_source.html | 2 +- reference/pca.html | 2 +- reference/plot-10.png | Bin 72304 -> 62433 bytes reference/plot-11.png | Bin 94847 -> 19275 bytes reference/plot-12.png | Bin 90342 -> 72304 bytes reference/plot-13.png | Bin 26557 -> 94847 bytes reference/plot-14.png | Bin 26524 -> 90342 bytes reference/plot-15.png | Bin 27742 -> 26557 bytes reference/plot-16.png | Bin 0 -> 40375 bytes reference/plot-17.png | Bin 0 -> 26524 bytes reference/plot-18.png | Bin 0 -> 40357 bytes reference/plot-19.png | Bin 0 -> 39510 bytes reference/plot-2.png | Bin 24961 -> 59121 bytes reference/plot-20.png | Bin 0 -> 27742 bytes reference/plot-3.png | Bin 27928 -> 54904 bytes reference/plot-4.png | Bin 30774 -> 24961 bytes reference/plot-5.png | Bin 27160 -> 27928 bytes reference/plot-6.png | Bin 33179 -> 30774 bytes reference/plot-7.png | Bin 80570 -> 27160 bytes reference/plot-8.png | Bin 62433 -> 33179 bytes reference/plot-9.png | Bin 19275 -> 80570 bytes reference/plot.html | 47 ++- reference/proportion.html | 2 +- reference/random.html | 2 +- reference/resistance_predict.html | 2 +- reference/skewness.html | 2 +- reference/top_n_microorganisms.html | 2 +- reference/translate.html | 2 +- search.json | 2 +- 101 files changed, 199 insertions(+), 431 deletions(-) create mode 100644 reference/as.mic-2.png create mode 100644 reference/as.mic-3.png create mode 100644 reference/as.mic-4.png create mode 100644 reference/plot-16.png create mode 100644 reference/plot-17.png create mode 100644 reference/plot-18.png create mode 100644 reference/plot-19.png create mode 100644 reference/plot-20.png diff --git a/404.html b/404.html index c35767cbc..9c4740478 100644 --- a/404.html +++ b/404.html @@ -32,7 +32,7 @@ AMR (for R) - 2.1.1.9253 + 2.1.1.9255