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(v1.0.0.9005) info printing only in interactive mode

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dr. M.S. (Matthijs) Berends
2020-02-21 21:13:38 +01:00
parent 47fe8b7820
commit ea32e9916a
28 changed files with 52 additions and 36 deletions
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NEWS.md
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# AMR 1.0.0.9004
# AMR 1.0.0.9005
## <small>Last updated: 21-Feb-2020</small>
### Changed
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```
* Added antibiotic abbreviations for a laboratory manufacturer (GLIMS) for cefuroxime, cefotaxime, ceftazidime, cefepime, cefoxitin and trimethoprim/sulfamethoxazole
* Added `uti` (as abbreviation of urinary tract infections) as parameter to `as.rsi()`, so interpretation of MIC values and disk zones can be made dependent on isolates specifically from UTIs
* Info printing in functions `eucast_rules()`, `first_isolate()`, `mdro()` and `resistance_predict()` will now at default only print when R is in an interactive mode (i.e. not in RMarkdown)
# AMR 1.0.0