From eb5d93843570b6b94ad7b2f566dc96d26e6da762 Mon Sep 17 00:00:00 2001 From: github-actions <41898282+github-actions[bot]@users.noreply.github.com> Date: Tue, 29 Apr 2025 15:25:00 +0000 Subject: [PATCH] Built site for AMR@2.1.1.9263: 04aec39 --- 404.html | 13 +- LICENSE-text.html | 4 +- articles/AMR.html | 289 +++++++++++------------ articles/AMR_for_Python.html | 13 +- articles/AMR_with_tidymodels.html | 13 +- articles/EUCAST.html | 13 +- articles/MDR.html | 13 +- articles/PCA.html | 13 +- articles/WHONET.html | 13 +- articles/datasets.html | 15 +- articles/index.html | 4 +- articles/welcome_to_AMR.html | 129 +++++----- authors.html | 4 +- deps/bootstrap-5.3.1/bootstrap.min.css | 2 +- index.html | 84 +++---- news/index.html | 18 +- pkgdown.yml | 4 +- reference/AMR-deprecated.html | 4 +- reference/AMR-options.html | 4 +- reference/AMR.html | 18 +- reference/WHOCC.html | 4 +- reference/WHONET.html | 6 +- reference/ab_from_text.html | 4 +- reference/ab_property.html | 6 +- reference/add_custom_antimicrobials.html | 4 +- reference/add_custom_microorganisms.html | 4 +- reference/age.html | 24 +- reference/age_groups.html | 4 +- reference/antibiogram.html | 16 +- reference/antimicrobial_selectors.html | 6 +- reference/antimicrobials.html | 6 +- reference/as.ab.html | 6 +- reference/as.av.html | 6 +- reference/as.disk.html | 4 +- reference/as.mic.html | 4 +- reference/as.mo.html | 6 +- reference/as.sir.html | 61 ++--- reference/atc_online.html | 4 +- reference/av_from_text.html | 4 +- reference/av_property.html | 6 +- reference/availability.html | 4 +- reference/bug_drug_combinations.html | 4 +- reference/clinical_breakpoints.html | 6 +- reference/count.html | 4 +- reference/custom_eucast_rules.html | 4 +- reference/dosage.html | 6 +- reference/eucast_rules.html | 6 +- reference/example_isolates.html | 6 +- reference/example_isolates_unclean.html | 6 +- reference/export_ncbi_biosample.html | 4 +- reference/first_isolate.html | 4 +- reference/g.test.html | 4 +- reference/get_episode.html | 108 ++++----- reference/ggplot_pca.html | 4 +- reference/ggplot_sir.html | 4 +- reference/guess_ab_col.html | 4 +- reference/index.html | 4 +- reference/intrinsic_resistant.html | 6 +- reference/italicise_taxonomy.html | 4 +- reference/join.html | 4 +- reference/key_antimicrobials.html | 4 +- reference/kurtosis.html | 8 +- reference/like.html | 4 +- reference/mdro.html | 4 +- reference/mean_amr_distance.html | 91 ++++--- reference/microorganisms.codes.html | 6 +- reference/microorganisms.groups.html | 6 +- reference/microorganisms.html | 6 +- reference/mo_matching_score.html | 6 +- reference/mo_property.html | 6 +- reference/mo_source.html | 4 +- reference/pca.html | 4 +- reference/plot-1.png | Bin 36242 -> 37398 bytes reference/plot-10.png | Bin 62433 -> 58859 bytes reference/plot-12.png | Bin 72304 -> 71759 bytes reference/plot-13.png | Bin 94847 -> 92543 bytes reference/plot-14.png | Bin 90342 -> 89321 bytes reference/plot-15.png | Bin 26557 -> 26047 bytes reference/plot-16.png | Bin 40375 -> 39905 bytes reference/plot-17.png | Bin 26524 -> 27608 bytes reference/plot-18.png | Bin 40357 -> 40988 bytes reference/plot-19.png | Bin 39510 -> 40166 bytes reference/plot-2.png | Bin 59121 -> 61047 bytes reference/plot-20.png | Bin 27742 -> 27810 bytes reference/plot-3.png | Bin 54904 -> 54708 bytes reference/plot-9.png | Bin 80570 -> 78431 bytes reference/plot.html | 4 +- reference/proportion.html | 4 +- reference/random.html | 38 +-- reference/resistance_predict.html | 4 +- reference/skewness.html | 6 +- reference/top_n_microorganisms.html | 4 +- reference/translate.html | 4 +- search.json | 2 +- 94 files changed, 625 insertions(+), 641 deletions(-) diff --git a/404.html b/404.html index 1278ef235..e649de219 100644 --- a/404.html +++ b/404.html @@ -6,12 +6,11 @@ Page not found (404) • AMR (for R) - - - - - - + + + + + @@ -32,7 +31,7 @@ AMR (for R) - 2.1.1.9259 + 2.1.1.9263