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dr. M.S. (Matthijs) Berends
2020-12-21 22:46:29 +01:00
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R/data.R
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@ -58,12 +58,12 @@
#' Synonyms (i.e. trade names) are derived from the Compound ID (`cid`) and consequently only available where a CID is available.
#'
#' ### Direct download
#' These data sets are available as 'flat files' for use even without R - you can find the files here:
#' These data sets are available as 'flat files' for use even without \R - you can find the files here:
#'
#' * <https://github.com/msberends/AMR/raw/master/data-raw/antibiotics.txt>
#' * <https://github.com/msberends/AMR/raw/master/data-raw/antivirals.txt>
#'
#' Files in R format (with preserved data structure) can be found here:
#' Files in \R format (with preserved data structure) can be found here:
#'
#' * <https://github.com/msberends/AMR/raw/master/data/antibiotics.rda>
#' * <https://github.com/msberends/AMR/raw/master/data/antivirals.rda>
@ -106,11 +106,11 @@
#' - `r format(nrow(subset(microorganisms, source == "DSMZ")), big.mark = ",")` species from the DSMZ (Deutsche Sammlung von Mikroorganismen und Zellkulturen) since the DSMZ contain the latest taxonomic information based on recent publications
#'
#' ### Direct download
#' This data set is available as 'flat file' for use even without R - you can find the file here:
#' This data set is available as 'flat file' for use even without \R - you can find the file here:
#'
#' * <https://github.com/msberends/AMR/raw/master/data-raw/microorganisms.txt>
#'
#' The file in R format (with preserved data structure) can be found here:
#' The file in \R format (with preserved data structure) can be found here:
#'
#' * <https://github.com/msberends/AMR/raw/master/data/microorganisms.rda>
#' @section About the records from DSMZ (see source):