1
0
mirror of https://github.com/msberends/AMR.git synced 2026-02-23 22:19:08 +01:00

Built site for AMR@3.0.1.9021: 12cf144

This commit is contained in:
github-actions
2026-02-12 19:45:10 +00:00
parent c149bb1f65
commit f0ec851466
94 changed files with 333 additions and 167 deletions

View File

@@ -3,7 +3,7 @@
**Note:** values on this page will change with every website update
since they are based on randomly created values and the page was written
in [R Markdown](https://rmarkdown.rstudio.com/). However, the
methodology remains unchanged. This page was generated on 09 February
methodology remains unchanged. This page was generated on 12 February
2026.
## Introduction
@@ -52,9 +52,9 @@ structure of your data generally look like this:
| date | patient_id | mo | AMX | CIP |
|:----------:|:----------:|:----------------:|:---:|:---:|
| 2026-02-09 | abcd | Escherichia coli | S | S |
| 2026-02-09 | abcd | Escherichia coli | S | R |
| 2026-02-09 | efgh | Escherichia coli | R | S |
| 2026-02-12 | abcd | Escherichia coli | S | S |
| 2026-02-12 | abcd | Escherichia coli | S | R |
| 2026-02-12 | efgh | Escherichia coli | R | S |
### Needed R packages
@@ -845,6 +845,10 @@ These functions can be used on their own:
``` r
our_data_1st %>% resistance(AMX)
#> `resistance()` assumes the EUCAST guideline and thus considers the 'I'
#> category susceptible. Set the `guideline` argument or the `AMR_guideline`
#> option to either "CLSI" or "EUCAST", see `?AMR-options`.
#> This message will be shown once per session.
#> [1] 0.4294272
```