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articles/PCA.md

@@ -78,6 +78,10 @@ resistance_data <- example_isolates %>%
     order, genus, AMC, CXM, CTX,
     CAZ, GEN, TOB, TMP, SXT
   ) # and select only relevant columns
+#> ℹ `resistance()` assumes the EUCAST guideline and thus considers the 'I'
+#>   category susceptible. Set the `guideline` argument or the `AMR_guideline`
+#>   option to either "CLSI" or "EUCAST", see `?AMR-options`.
+#> ℹ This message will be shown once per session.
 
 head(resistance_data)
 #> # A tibble: 6 × 10