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mirror of https://github.com/msberends/AMR.git synced 2025-07-09 00:02:38 +02:00

(v1.7.0) unit tests

This commit is contained in:
2021-05-26 14:04:12 +02:00
parent 41d279daa1
commit f1d9b489c5
26 changed files with 333 additions and 351 deletions

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@ -98,7 +98,7 @@ This package can be used for:
#### Latest released version
This package is available on the [rOpenSci R-universe platform](https://ropensci.org/r-universe/), as CRAN does not allow frequent updates of large packages. With CRAN, we cannot update this package frequently enough to implement the latest EUCAST/CLSI guidelines or the latest microbial taxonomy.
This package is [available here](https://msberends.r-universe.dev) on the [rOpenSci R-universe platform](https://ropensci.org/r-universe/), as CRAN does not allow frequent updates of large packages (though the `AMR` package is only 7-9 MB). With CRAN, we apparently cannot update this package frequently enough to implement the latest EUCAST/CLSI guidelines or the latest microbial taxonomy.
Install this package in R by using the command:
@ -111,9 +111,6 @@ It will be downloaded and installed automatically.
**Note:** Not all functions on this website may be available in this latest release. To use all functions and data sets mentioned on this website, install the latest development version.
#### Latest development version
![R-code-check](https://github.com/msberends/AMR/workflows/R-code-check/badge.svg?branch=master)
[![CodeFactor](https://www.codefactor.io/repository/github/msberends/amr/badge)](https://www.codefactor.io/repository/github/msberends/amr)
[![Codecov](https://codecov.io/gh/msberends/AMR/branch/master/graph/badge.svg)](https://codecov.io/gh/msberends/AMR?branch=master)
The latest and unpublished development version can be installed from GitHub using:
@ -122,6 +119,10 @@ install.packages("remotes") # if you haven't already
remotes::install_github("msberends/AMR")
```
![R-code-check](https://github.com/msberends/AMR/workflows/R-code-check/badge.svg?branch=master)
![[CodeFactor](https://www.codefactor.io/repository/github/msberends/amr/badge)](https://www.codefactor.io/repository/github/msberends/amr)
![[Codecov](https://codecov.io/gh/msberends/AMR/branch/master/graph/badge.svg)](https://codecov.io/gh/msberends/AMR?branch=master)
You can also download the latest build from our repository: <https://github.com/msberends/AMR/raw/master/data-raw/AMR_latest.tar.gz>
### Get started