P281424/AMR
1
0
Fork 0
mirror of https://github.com/msberends/AMR.git synced 2025-07-12 04:21:49 +02:00
Code Releases Activity

(v1.1.0.9007) lose dependencies

Browse Source
This commit is contained in:
dr. M.S. (Matthijs) Berends
2020-05-16 21:40:50 +02:00
parent 29609a0e2c
commit f68d71a5e0
44 changed files with 178 additions and 140 deletions
Download Patch File Download Diff File Expand all files Collapse all files

7
man/proportion.Rd
View File

@ -160,8 +160,7 @@ proportion_I(example_isolates$AMX)
proportion_IR(example_isolates$AMX)
proportion_R(example_isolates$AMX)
if (!require("dplyr")) {
library(dplyr)
if (require("dplyr")) {
example_isolates \%>\%
group_by(hospital_id) \%>\%
summarise(r = resistance(CIP),
@ -218,7 +217,9 @@ if (!require("dplyr")) {
select(hospital_id, AMX, CIP) \%>\%
group_by(hospital_id) \%>\%
proportion_df(translate = FALSE)
}
\dontrun{
# calculate current empiric combination therapy of Helicobacter gastritis:
my_table \%>\%
filter(first_isolate == TRUE,