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(v2.1.1.9186) replace antibiotics with antimicrobials!

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dr. M.S. (Matthijs) Berends
2025-03-07 20:43:26 +01:00
parent f2b2a450cb
commit f7938289eb
140 changed files with 4870 additions and 4702 deletions
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6
_pkgdown.yml
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@ -151,9 +151,9 @@ reference:
- "`add_custom_microorganisms`"
- "`mo_source`"
- title: "Preparing data: antibiotics"
- title: "Preparing data: antimicrobials"
desc: >
Use these functions to get valid properties of antibiotics from any input or to clean your input.
Use these functions to get valid properties of antimicrobials from any input or to clean your input.
You can even retrieve drug names and doses from clinical text records, using `ab_from_text()`.
contents:
- "`as.ab`"
@ -236,7 +236,7 @@ reference:
for more information about how to work with functions in this package.
contents:
- "`microorganisms`"
- "`antibiotics`"
- "`antimicrobials`"
- "`clinical_breakpoints`"
- "`example_isolates`"
- "`microorganisms.codes`"