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(v2.1.1.9186) replace antibiotics with antimicrobials!

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dr. M.S. (Matthijs) Berends
2025-03-07 20:43:26 +01:00
parent f2b2a450cb
commit f7938289eb
140 changed files with 4870 additions and 4702 deletions
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34
tests/testthat/test-italicise_taxonomy.R
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@@ -27,21 +27,23 @@
# how to conduct AMR data analysis: https://msberends.github.io/AMR/ #
# ==================================================================== #
expect_identical(
italicise_taxonomy("test for E. coli"),
"test for *E. coli*"
)
expect_identical(
italicise_taxonomy("test for E. coli"),
italicize_taxonomy("test for E. coli")
)
if (AMR:::has_colour()) {
test_that("italicise_taxonomy works", {
expect_identical(
italicise_taxonomy("test for E. coli", type = "ansi"),
"test for \033[3mE. coli\033[23m"
italicise_taxonomy("test for E. coli"),
"test for *E. coli*"
)
}
expect_identical(
italicise_taxonomy("test for E. coli", "html"),
"test for <i>E. coli</i>"
)
expect_identical(
italicise_taxonomy("test for E. coli"),
italicize_taxonomy("test for E. coli")
)
if (AMR:::has_colour()) {
expect_identical(
italicise_taxonomy("test for E. coli", type = "ansi"),
"test for \033[3mE. coli\033[23m"
)
}
expect_identical(
italicise_taxonomy("test for E. coli", "html"),
"test for <i>E. coli</i>"
)
})