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dr. M.S. (Matthijs) Berends
2019-01-26 23:22:56 +01:00
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vignettes/AMR.Rmd
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@ -41,14 +41,17 @@ knitr::kable(dplyr::tibble(date = Sys.Date(),
```
## Needed R packages
As with many uses in R, we need some additional packages for AMR analysis. The most important one is [`dplyr`](https://dplyr.tidyverse.org/), which tremendously improves the way we work with data - it allows for a very natural way of writing syntaxes in R. Another important dependency is [`ggplot2`](https://ggplot2.tidyverse.org/). This package can be used to create beautiful plots in R.
As with many uses in R, we need some additional packages for AMR analysis. Our package works closely together with the [tidyverse packages](https://www.tidyverse.org) [`dplyr`](https://dplyr.tidyverse.org/) and [`ggplot2`](https://ggplot2.tidyverse.org) by [Dr Hadley Wickham](https://www.linkedin.com/in/hadleywickham/). The tidyverse tremendously improves the way we conduct data science - it allows for a very natural way of writing syntaxes and creating beautiful plots in R.
Our `AMR` package depends on these packages and even extends their use and functions.
Our `AMR` package depends on these packages and even extends their use and functions.
```{r lib packages, message = FALSE}
library(dplyr) # the data science package
library(AMR) # this package, to simplify and automate AMR analysis
library(ggplot2) # for appealing plots
library(dplyr)
library(ggplot2)
library(AMR)
# (if not yet installed, install with:)
# install.packages(c("tidyverse", "AMR"))
```
## Creation of data