v1.7.0

docs/articles/AMR_files/header-attrs-2.8/header-attrs.js

@@ -0,0 +1,12 @@
+// Pandoc 2.9 adds attributes on both header and div. We remove the former (to
+// be compatible with the behavior of Pandoc < 2.8).
+document.addEventListener('DOMContentLoaded', function(e) {
+  var hs = document.querySelectorAll("div.section[class*='level'] > :first-child");
+  var i, h, a;
+  for (i = 0; i < hs.length; i++) {
+    h = hs[i];
+    if (!/^h[1-6]$/i.test(h.tagName)) continue;  // it should be a header h1-h6
+    a = h.attributes;
+    while (a.length > 0) h.removeAttribute(a[0].name);
+  }
+});

inst/tinytest/test-rsi.R

@@ -45,7 +45,7 @@ expect_equal(summary(as.rsi(c("S", "R"))),
                          "- %S" = "50.0% (n=1)",
                          "- %I" = " 0.0% (n=0)"), class = c("summaryDefault", "table")))
 expect_identical(as.logical(lapply(example_isolates, is.rsi.eligible)),
-                 rep(FALSE, length(example_isolates)))
+                 as.logical(lapply(example_isolates, is.rsi)))
 expect_error(as.rsi.mic(as.mic(16)))
 expect_error(as.rsi.disk(as.disk(16)))
 expect_error(get_guideline("this one does not exist"))