# ==================================================================== # # TITLE # # Antimicrobial Resistance (AMR) Analysis # # # # SOURCE # # https://gitlab.com/msberends/AMR # # # # LICENCE # # (c) 2018-2020 Berends MS, Luz CF et al. # # # # This R package is free software; you can freely use and distribute # # it for both personal and commercial purposes under the terms of the # # GNU General Public License version 2.0 (GNU GPL-2), as published by # # the Free Software Foundation. # # # # We created this package for both routine data analysis and academic # # research and it was publicly released in the hope that it will be # # useful, but it comes WITHOUT ANY WARRANTY OR LIABILITY. # # Visit our website for more info: https://msberends.gitlab.io/AMR. # # ==================================================================== # context("ab_from_text.R") test_that("ab_from_text works", { expect_identical(ab_from_text("28/03/2020 regular amoxicilliin 500mg po tds"), "Amoxicillin") expect_identical(ab_from_text("28/03/2020 regular amoxicilliin 500mg po tds", translate_ab = FALSE), as.ab("AMX")) expect_identical(ab_from_text("administered amoxi/clav and cipro", collapse = ", "), "Amoxicillin, Ciprofloxacin") })