# ==================================================================== #
# TITLE                                                                #
# Antimicrobial Resistance (AMR) Analysis                              #
#                                                                      #
# SOURCE                                                               #
# https://gitlab.com/msberends/AMR                                     #
#                                                                      #
# LICENCE                                                              #
# (c) 2018-2020 Berends MS, Luz CF et al.                              #
#                                                                      #
# This R package is free software; you can freely use and distribute   #
# it for both personal and commercial purposes under the terms of the  #
# GNU General Public License version 2.0 (GNU GPL-2), as published by  #
# the Free Software Foundation.                                        #
#                                                                      #
# We created this package for both routine data analysis and academic  #
# research and it was publicly released in the hope that it will be    #
# useful, but it comes WITHOUT ANY WARRANTY OR LIABILITY.              #
# Visit our website for more info: https://msberends.gitlab.io/AMR.    #
# ==================================================================== #

#######################################################################
# To push new commits to the premaster branch, run:                   #
# bash git_premaster.sh "commit message"                              #
# This creates auto version numbering in DESCRIPTION and NEWS.md.     #
#                                                                     #
# After successful CRAN checks, merge it to the master branch with:   #
# bash git_merge.sh                                                   #
#                                                                     #
# To prerelease a new version number, run:                            #
# bash git_premaster.sh "v0.x.x" FALSE "0.x.x"                        #
#######################################################################

# stash current changes
# git stash --quiet

# go to master
git checkout master --quiet
echo "• changed branch to master"

# import everything from premaster
git merge premaster --quiet
# and send it to git
git push --quiet
echo "• pushed changes to master"

# return to premaster
git checkout premaster --quiet
echo "• changed branch back to premaster"
git status --short
echo

read -p "Use R-hub to simulate all CRAN checks (y/N)? " choice
case "$choice" in
  y|Y|j|J ) ;;
  * ) exit 1;;
esac
Rscript -e "rhub::check(devtools::build(), platform = c('debian-clang-devel', 'debian-gcc-devel', 'fedora-clang-devel', 'fedora-gcc-devel', 'windows-x86_64-devel', 'debian-gcc-patched', 'solaris-x86-patched', 'debian-gcc-release', 'windows-x86_64-release', 'macos-elcapitan-release', 'windows-x86_64-oldrel'))"
echo

# and get stashed changes back
# git stash apply --quiet