/* # ==================================================================== # # TITLE: # # AMR: An R Package for Working with Antimicrobial Resistance Data # # # # SOURCE CODE: # # https://github.com/msberends/AMR # # # # PLEASE CITE THIS SOFTWARE AS: # # Berends MS, Luz CF, Friedrich AW, et al. (2022). # # AMR: An R Package for Working with Antimicrobial Resistance Data. # # Journal of Statistical Software, 104(3), 1-31. # # https://doi.org/10.18637/jss.v104.i03 # # # # Developed at the University of Groningen and the University Medical # # Center Groningen in The Netherlands, in collaboration with many # # colleagues from around the world, see our website. # # # # This R package is free software; you can freely use and distribute # # it for both personal and commercial purposes under the terms of the # # GNU General Public License version 2.0 (GNU GPL-2), as published by # # the Free Software Foundation. # # We created this package for both routine data analysis and academic # # research and it was publicly released in the hope that it will be # # useful, but it comes WITHOUT ANY WARRANTY OR LIABILITY. # # # # Visit our website for the full manual and a complete tutorial about # # how to conduct AMR data analysis: https://msberends.github.io/AMR/ # # ==================================================================== # */ :root, .navbar * { --amr-green-light: #a7dbc3; --amr-green-light-rgb: 167, 219, 195; --amr-green-dark: #128f76; --amr-green-dark-rgb: 18, 143, 118; --amr-green-middle: #60a799; --amr-green-middle-rgb: 96, 167, 153; --amr-blue-light: #a8d5ef; --amr-blue-light-rgb: 168, 213, 239; --bs-success: var(--amr-green-dark) !important; --bs-light: var(--amr-green-light) !important; /* --bs-light was this: #128f76a6; that's success with 60% alpha */ --bs-info: var(--amr-green-middle) !important; --bs-link-color: var(--amr-green-dark) !important; --bs-link-color-rgb: var(--amr-green-dark-rgb) !important; --bs-primary: var(--amr-green-dark) !important; --bs-primary-color: var(--amr-green-dark) !important; --bs-primary-rgb: var(--amr-green-dark-rgb) !important; --bs-secondary: white !important; --bs-secondary-color: var(--amr-green-dark) !important; --bs-secondary-rgb: 255, 255, 255 !important; --bs-navbar-brand-color: white !important; --bs-navbar-brand-color-hover: white !important; --bs-nav-link-color: white !important; --bs-navbar-active-color: var(--amr-green-light) !important; --bs-bg-opacity: 1 !important; --bs-dropdown-bg: var(--amr-green-dark) !important; --bs-dropdown-link-color: white !important; --bs-dropdown-link-color: white !important; --bs-dropdown-link-hover-color: var(--amr-green-light) !important; --bs-dropdown-link-hover-bg: var(--amr-green-dark) !important; --bs-dropdown-link-active-color: white !important; } /* Python page */ body.amr-for-python * { --amr-green-light: #FFD43B; /* Python yellow */ --amr-green-light-rgb: 255, 212, 59; --amr-green-dark: #306998; /* Python blue */ --amr-green-dark-rgb: 48, 105, 152; --amr-green-middle: #b1bc5e; /* Adjusted middle yellow */ --amr-green-middle-rgb: 177, 188, 94; --bs-success: var(--amr-green-dark) !important; --bs-light: var(--amr-green-light) !important; --bs-info: var(--amr-green-middle) !important; --bs-link-color: var(--amr-green-dark) !important; --bs-link-color-rgb: var(--amr-green-dark-rgb) !important; --bs-primary: var(--amr-green-dark) !important; --bs-primary-color: var(--amr-green-dark) !important; --bs-primary-rgb: var(--amr-green-dark-rgb) !important; --bs-secondary-color: var(--amr-green-dark) !important; --bs-navbar-active-color: var(--amr-green-light) !important; --bs-dropdown-bg: var(--amr-green-dark) !important; --bs-dropdown-link-hover-color: var(--amr-green-light) !important; --bs-dropdown-link-hover-bg: var(--amr-green-dark) !important; } .nav-text.text-muted, .bg-primary .navbar-nav .show>.nav-link, .bg-primary .navbar-nav .nav-link.active, .bg-primary .navbar-nav .nav-link:hover, .bg-primary .navbar-nav .nav-link:focus { color: var(--amr-green-light) !important; } .navbar-dark .navbar-nav .nav-item > .nav-link:hover, .navbar-light .navbar-nav .nav-item>.nav-link:hover { background: none !important; } .navbar-dark input[type="search"] { background-color: var(--amr-green-light) !important; } .navbar-nav .nav-item > .nav-link { border-radius: 0 !important; } .form-control:focus { box-shadow: none !important; } .template-home img.logo { width: 200px; } .template-home .endorse_img { width: 150px; } .template-reference-index .section-desc { font-style: italic; text-align: justify; font-size: 16px; } @media (max-width: 575.98px) { .template-home img.logo { width: 140px; } } /* fix some footer issues with the logos */ @media (min-width: 576px) { footer .pkgdown-footer-right { width: 300px; } } @media (max-width: 575.98px) { footer .pkgdown-footer-left { text-align: center; } footer .pkgdown-footer-right { text-align: center; } } /* replace 'Developers' with 'Maintainers' */ .developers h2 { display: none; } .developers:before { content: 'Maintainers'; } /* marked words for after using the search box */ mark, .mark { background: var(--amr-green-light) !important; } /* smaller tables */ .table { font-size: 0.9em !important; } /* SYNTAX */ /* These are simple changes for the syntax highlighting */ pre { font-size: 0.8em !important; } code, .code { font-feature-settings: "ss02", "ss06"; /* don't wrap syntax on small devices: */ word-wrap: normal !important; word-break: keep-all !important; white-space: pre !important; } .ot, .dv, .fl, .cn, .at, .op a { /* numbers, TRUE/FALSE and operators */ color: var(--bs-dark) !important; } pre .fu, .fu { /* functions */ color: var(--amr-green-dark) !important; } pre .fu a:hover, .fu a:hover { /* functions */ color: var(--amr-green-light) !important; text-decoration: underline; } pre .st, .st { /* strings, regular text */ color: var(--amr-green-middle) !important; } pre .co, .co { /* comments */ color: var(--amr-green-dark) !important; font-style: italic !important; } pre code .r-out, pre code .r-msg { /* output of functions */ color: var(--bs-gray-600) !important; font-style: normal !important; } code a[href], a[href] code, pre a[href], a code[href], a pre[href] { /* adjusted colour for all real links; having href attribute */ color: var(--amr-green-dark); text-decoration: none; } a[href] { text-decoration: none; } code a[href]:hover, code a[href]:focus, a[href] code:hover, a[href] code:focus, pre a[href]:hover, pre a[href]:focus, a code[href]:hover, a code[href]:focus, a pre[href]:hover, a pre[href]:focus, a[href]:hover, a[href]:focus { /* adjusted colour for all real links; having href attribute */ text-decoration: underline; } strong code { font-weight: normal !important; }