context("g.test.R") test_that("G-test works", { # GOODNESS-OF-FIT # example 1: clearfield rice vs. red rice x <- c(772, 1611, 737) expect_equal(g.test(x, p = c(0.25, 0.50, 0.25))$p.value, expected = 0.12574, tolerance = 0.00001) # example 2: red crossbills x <- c(1752, 1895) expect_equal(g.test(x)$p.value, expected = 0.01787343, tolerance = 0.00000001) expect_error(g.test(0)) expect_error(g.test(c(0, 1), 0)) expect_error(g.test(c(1, 2, 3, 4), p = c(0.25, 0.25))) expect_error(g.test(c(1, 2, 3, 4), p = c(0.25, 0.25, 0.25, 0.24))) expect_warning(g.test(c(1, 2, 3, 4), p = c(0.25, 0.25, 0.25, 0.24), rescale.p = TRUE)) # INDEPENDENCE x <- as.data.frame( matrix(data = round(runif(4) * 100000, 0), ncol = 2, byrow = TRUE) ) expect_lt(g.test(x)$p.value, 1) expect_warning(g.test(x = c(772, 1611, 737), y = c(780, 1560, 780), rescale.p = TRUE)) expect_error(g.test(matrix(data = c(-1, -2, -3 , -4), ncol = 2, byrow = TRUE))) expect_error(g.test(matrix(data = c(0, 0, 0, 0), ncol = 2, byrow = TRUE))) })