# ==================================================================== # # TITLE # # Antimicrobial Resistance (AMR) Analysis # # # # SOURCE # # https://github.com/msberends/AMR # # # # LICENCE # # (c) 2018-2020 Berends MS, Luz CF et al. # # # # This R package is free software; you can freely use and distribute # # it for both personal and commercial purposes under the terms of the # # GNU General Public License version 2.0 (GNU GPL-2), as published by # # the Free Software Foundation. # # # # We created this package for both routine data analysis and academic # # research and it was publicly released in the hope that it will be # # useful, but it comes WITHOUT ANY WARRANTY OR LIABILITY. # # Visit our website for more info: https://msberends.github.io/AMR. # # ==================================================================== # #' Symbol of a p-value #' #' Return the symbol related to the p-value: 0 '`***`' 0.001 '`**`' 0.01 '`*`' 0.05 '`.`' 0.1 ' ' 1. Values above `p = 1` will return `NA`. #' @inheritSection lifecycle Questioning lifecycle #' @param p p value #' @param emptychar text to show when `p > 0.1` #' @return Text #' @inheritSection AMR Read more on our website! #' @export p_symbol <- function(p, emptychar = " ") { p <- as.double(p) s <- rep(NA_character_, length(p)) s[p <= 1] <- emptychar s[p <= 0.100] <- "." s[p <= 0.050] <- "*" s[p <= 0.010] <- "**" s[p <= 0.001] <- "***" s }