microorganisms.certe.RdA data set containing all bacteria codes of Certe MMB. These codes can be joined to data with an ID from microorganisms$mo (using left_join_microorganisms). GLIMS codes can also be translated to valid MOs with guess_mo.
microorganisms.certe
A data.frame with 2,665 observations and 2 variables:
certeCode of microorganism according to Certe MMB
moCode of microorganism in microorganisms
On our website https://msberends.gitlab.io/AMR you can find a omprehensive tutorial about how to conduct AMR analysis and find the complete documentation of all functions, which reads a lot easier than in R.