# ==================================================================== # # TITLE # # Antimicrobial Resistance (AMR) Analysis # # # # SOURCE # # https://gitlab.com/msberends/AMR # # # # LICENCE # # (c) 2019 Berends MS (m.s.berends@umcg.nl), Luz CF (c.f.luz@umcg.nl) # # # # This R package is free software; you can freely use and distribute # # it for both personal and commercial purposes under the terms of the # # GNU General Public License version 2.0 (GNU GPL-2), as published by # # the Free Software Foundation. # # # # This R package was created for academic research and was publicly # # released in the hope that it will be useful, but it comes WITHOUT # # ANY WARRANTY OR LIABILITY. # # Visit our website for more info: https://msberends.gitab.io/AMR. # # ==================================================================== # context("mo_history.R") test_that("mo_history works", { clean_mo_history(force = TRUE) expect_equal(read_mo_history(force = TRUE), NULL) expect_equal(as.character(suppressWarnings(as.mo("testsubject"))), "UNKNOWN") set_mo_history("testsubject", "B_ESCHR_COL", uncertainty_level = translate_allow_uncertain(TRUE), force = TRUE) expect_equal(get_mo_history("testsubject", uncertainty_level = translate_allow_uncertain(TRUE), force = TRUE), "B_ESCHR_COL") expect_equal(as.character(as.mo("testsubject", force_mo_history = TRUE)), "B_ESCHR_COL") expect_equal(colnames(read_mo_history(force = TRUE)), c("x", "mo", "uncertainty_level", "package_version")) })