## 0.2.0 #### New - Full support for Windows, Linux and macOS - Function `guess_bactid` to determine the ID of a microorganism based on genus/species or known abbreviations like MRSA - Functions `clipboard_import` and `clipboard_export` as helper functions to quickly copy and paste from/to software like Excel and SPSS - Function `MDRO` to determine Multi Drug Resistant Organisms (MDRO) with support for country-specific guidelines. Suggest your own via https://github.com/msberends/AMR/issues/new. Functions `BRMO` and `MRGN` are wrappers for Dutch and German guidelines, respectively - Function `freq` to create frequency tables, with additional info in a header - New algorithm to determine weighted isolates, can now be `"points"` or `"keyantibiotics"`, see `?first_isolate` - New print format for tibbles and data.tables #### Changed - Support for older R versions, only R 3.1.0 and later is needed - Renamed dataset `ablist` to `antibiotics` - Renamed dataset `bactlist` to `microorganisms` - Added more microorganisms to `bactlist` - Added analysis examples on help page of dataset `septic_patients` - Added support for character vector in `join` functions - Added warnings when a join results in more rows after than before the join - Altered `%like%` to make it case insensitive - For parameters of functions `first_isolate` and `EUCAST_rules` the column names are now case-insensitive - Functions `as.rsi` and `as.mic` now add the package name and version as attribute #### Other - Expanded README.md with more examples - Added ORC IDs of authors to DESCRIPTION file - Added unit testing with the `testthat` package - Added build tests for Linux and macOS using Travis CI (https://travis-ci.org/msberends/AMR) - Added Line coverage checking using CodeCov (https://codecov.io/gh/msberends/AMR/tree/master/R) ## 0.1.1 - `EUCAST_rules` applies for amoxicillin even if ampicillin is missing - Edited column names to comply with GLIMS, the laboratory information system - Added more valid MIC values - Renamed 'Daily Defined Dose' to 'Defined Daily Dose' - Added barplots for `rsi` and `mic` classes ## 0.1.0 - First submission to CRAN.