# Generated by roxygen2: do not edit by hand S3method(as.data.frame,atc) S3method(as.data.frame,frequency_tbl) S3method(as.data.frame,mo) S3method(as.double,mic) S3method(as.integer,mic) S3method(as.numeric,mic) S3method(as.vector,frequency_tbl) S3method(as_tibble,frequency_tbl) S3method(barplot,mic) S3method(barplot,rsi) S3method(diff,frequency_tbl) S3method(droplevels,mic) S3method(droplevels,rsi) S3method(format,frequency_tbl) S3method(hist,frequency_tbl) S3method(kurtosis,data.frame) S3method(kurtosis,default) S3method(kurtosis,matrix) S3method(plot,frequency_tbl) S3method(plot,mic) S3method(plot,resistance_predict) S3method(plot,rsi) S3method(print,atc) S3method(print,frequency_tbl) S3method(print,mic) S3method(print,mo) S3method(print,mo_renamed) S3method(print,mo_uncertainties) S3method(print,rsi) S3method(pull,atc) S3method(pull,mo) S3method(select,frequency_tbl) S3method(skewness,data.frame) S3method(skewness,default) S3method(skewness,matrix) S3method(summary,mic) S3method(summary,mo) S3method(summary,rsi) export("%like%") export(EUCAST_rules) export(ab_atc) export(ab_certe) export(ab_name) export(ab_official) export(ab_property) export(ab_tradenames) export(ab_trivial_nl) export(ab_umcg) export(abname) export(age) export(age_groups) export(anti_join_microorganisms) export(as.atc) export(as.mic) export(as.mo) export(as.rsi) export(atc_certe) export(atc_ddd) export(atc_groups) export(atc_name) export(atc_official) export(atc_online_ddd) export(atc_online_groups) export(atc_online_property) export(atc_property) export(atc_tradenames) export(atc_trivial_nl) export(atc_umcg) export(availability) export(brmo) export(catalogue_of_life_version) export(clean_mo_history) export(count_I) export(count_IR) export(count_R) export(count_S) export(count_SI) export(count_all) export(count_df) export(eucast_exceptional_phenotypes) export(eucast_rules) export(facet_rsi) export(filter_1st_cephalosporins) export(filter_2nd_cephalosporins) export(filter_3rd_cephalosporins) export(filter_4th_cephalosporins) export(filter_ab_class) export(filter_aminoglycosides) export(filter_carbapenems) export(filter_cephalosporins) export(filter_first_isolate) export(filter_first_weighted_isolate) export(filter_fluoroquinolones) export(filter_glycopeptides) export(filter_macrolides) export(filter_tetracyclines) export(first_isolate) export(freq) export(frequency_tbl) export(full_join_microorganisms) export(g.test) export(geom_rsi) export(get_locale) export(get_mo_source) export(ggplot_rsi) export(ggplot_rsi_predict) export(guess_ab_col) export(guess_atc) export(guess_mo) export(header) export(inner_join_microorganisms) export(interpretive_reading) export(is.atc) export(is.mic) export(is.mo) export(is.rsi) export(is.rsi.eligible) export(key_antibiotics) export(key_antibiotics_equal) export(kurtosis) export(labels_rsi_count) export(left_join_microorganisms) export(like) export(mdro) export(mo_authors) export(mo_class) export(mo_failures) export(mo_family) export(mo_fullname) export(mo_genus) export(mo_gramstain) export(mo_kingdom) export(mo_order) export(mo_phylum) export(mo_property) export(mo_rank) export(mo_ref) export(mo_renamed) export(mo_shortname) export(mo_species) export(mo_subspecies) export(mo_taxonomy) export(mo_type) export(mo_uncertainties) export(mo_url) export(mo_year) export(mrgn) export(n_rsi) export(p.symbol) export(portion_I) export(portion_IR) export(portion_R) export(portion_S) export(portion_SI) export(portion_df) export(ratio) export(read.4D) export(resistance_predict) export(right_join_microorganisms) export(rsi) export(rsi_predict) export(scale_rsi_colours) export(scale_y_percent) export(semi_join_microorganisms) export(set_mo_source) export(skewness) export(theme_rsi) export(top_freq) exportMethods(as.data.frame.atc) exportMethods(as.data.frame.frequency_tbl) exportMethods(as.data.frame.mo) exportMethods(as.double.mic) exportMethods(as.integer.mic) exportMethods(as.numeric.mic) exportMethods(as.vector.frequency_tbl) exportMethods(as_tibble.frequency_tbl) exportMethods(barplot.mic) exportMethods(barplot.rsi) exportMethods(diff.frequency_tbl) exportMethods(droplevels.mic) exportMethods(droplevels.rsi) exportMethods(format.frequency_tbl) exportMethods(hist.frequency_tbl) exportMethods(kurtosis) exportMethods(kurtosis.data.frame) exportMethods(kurtosis.default) exportMethods(kurtosis.matrix) exportMethods(plot.frequency_tbl) exportMethods(plot.mic) exportMethods(plot.rsi) exportMethods(print.atc) exportMethods(print.frequency_tbl) exportMethods(print.mic) exportMethods(print.mo) exportMethods(print.mo_renamed) exportMethods(print.mo_uncertainties) exportMethods(print.rsi) exportMethods(pull.atc) exportMethods(pull.mo) exportMethods(select.frequency_tbl) exportMethods(skewness) exportMethods(skewness.data.frame) exportMethods(skewness.default) exportMethods(skewness.matrix) exportMethods(summary.mic) exportMethods(summary.mo) exportMethods(summary.rsi) importFrom(crayon,bgGreen) importFrom(crayon,bgRed) importFrom(crayon,bgYellow) importFrom(crayon,black) importFrom(crayon,blue) importFrom(crayon,bold) importFrom(crayon,green) importFrom(crayon,has_color) importFrom(crayon,italic) importFrom(crayon,magenta) importFrom(crayon,red) importFrom(crayon,silver) importFrom(crayon,strip_style) importFrom(crayon,yellow) importFrom(data.table,as.data.table) importFrom(data.table,data.table) importFrom(data.table,setkey) importFrom(dplyr,"%>%") importFrom(dplyr,all_vars) importFrom(dplyr,any_vars) importFrom(dplyr,arrange) importFrom(dplyr,arrange_at) importFrom(dplyr,as_tibble) importFrom(dplyr,between) importFrom(dplyr,bind_cols) importFrom(dplyr,bind_rows) importFrom(dplyr,case_when) importFrom(dplyr,desc) importFrom(dplyr,distinct) importFrom(dplyr,everything) importFrom(dplyr,filter) importFrom(dplyr,filter_all) importFrom(dplyr,filter_at) importFrom(dplyr,full_join) importFrom(dplyr,funs) importFrom(dplyr,group_by) importFrom(dplyr,group_by_at) importFrom(dplyr,group_vars) importFrom(dplyr,if_else) importFrom(dplyr,lag) importFrom(dplyr,left_join) importFrom(dplyr,mutate) importFrom(dplyr,mutate_all) importFrom(dplyr,mutate_at) importFrom(dplyr,n) importFrom(dplyr,n_distinct) importFrom(dplyr,n_groups) importFrom(dplyr,progress_estimated) importFrom(dplyr,pull) importFrom(dplyr,row_number) importFrom(dplyr,select) importFrom(dplyr,select_if) importFrom(dplyr,slice) importFrom(dplyr,summarise) importFrom(dplyr,summarise_if) importFrom(dplyr,tibble) importFrom(dplyr,top_n) importFrom(dplyr,transmute) importFrom(dplyr,ungroup) importFrom(dplyr,vars) importFrom(grDevices,boxplot.stats) importFrom(graphics,arrows) importFrom(graphics,axis) importFrom(graphics,barplot) importFrom(graphics,hist) importFrom(graphics,plot) importFrom(graphics,points) importFrom(graphics,text) importFrom(hms,is.hms) importFrom(knitr,kable) importFrom(rlang,as_label) importFrom(rlang,enquos) importFrom(rlang,eval_tidy) importFrom(stats,complete.cases) importFrom(stats,fivenum) importFrom(stats,glm) importFrom(stats,lm) importFrom(stats,mad) importFrom(stats,pchisq) importFrom(stats,predict) importFrom(stats,sd) importFrom(utils,browseURL) importFrom(utils,browseVignettes) importFrom(utils,installed.packages)