/*
# ==================================================================== #
# TITLE                                                                #
# Antimicrobial Resistance (AMR) Analysis                              #
#                                                                      #
# SOURCE                                                               #
# https://gitlab.com/msberends/AMR                                     #
#                                                                      #
# LICENCE                                                              #
# (c) 2019 Berends MS (m.s.berends@umcg.nl), Luz CF (c.f.luz@umcg.nl)  #
#                                                                      #
# This R package is free software; you can freely use and distribute   #
# it for both personal and commercial purposes under the terms of the  #
# GNU General Public License version 2.0 (GNU GPL-2), as published by  #
# the Free Software Foundation.                                        #
#                                                                      #
# This R package was created for academic research and was publicly    #
# released in the hope that it will be useful, but it comes WITHOUT    #
# ANY WARRANTY OR LIABILITY.                                           #
# Visit our website for more info: https://msberends.gitab.io/AMR.     #
# ==================================================================== #
*/

// Add updated Font Awesome 5.6.3 library
$('head').append('<!-- Updated Font Awesome library --><link rel="stylesheet" href="https://use.fontawesome.com/releases/v5.6.3/css/all.css" integrity="sha384-UHRtZLI+pbxtHCWp1t77Bi1L4ZtiqrqD80Kn4Z8NTSRyMA2Fd33n5dQ8lWUE00s/" crossorigin="anonymous">');

// Edit footer
$( document ).ready(function() {

  // redirect to GitLab
  var url_old = window.location.href;
  var url_new = url_old.replace("github", "gitlab");
  if (url_old != url_new) {
    window.location.replace(url_new);
  }

  $('#sidebar').prepend(
    '<div id="r4ds">' +
    '  <a href="https://r4ds.had.co.nz/">' +
    '    <img src="../../AMR/cover_r4ds.png" width="25%">' +
    '  </a>' +
    '  <p>Learn R reading this great book!</p>' +
    '  <p>Or read it free online: <a href="https://r4ds.had.co.nz/" target="_blank">r4ds.co.nz</a>.</p>' +
    '  <hr>' +
    '</div>');

  $('footer').html(
    '<div>' +
      '<p>' + $('footer .copyright p').html().replace(
        "Developed by",
        '<code>AMR</code> (for R). Developed at the <a href="https://www.rug.nl" target="_blank">University of Groningen</a>.<br>Authors:') + '</p>' +
      '<a href="https://www.rug.nl" target="_blank"><img src="../../AMR/logo_rug.png" class="footer_logo"></a>' +
    '</div>');

  // Edit title of manual
  $('.template-reference-index h1').text('Manual');
});

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