#!/bin/bash

# ==================================================================== #
# TITLE:                                                               #
# AMR: An R Package for Working with Antimicrobial Resistance Data     #
#                                                                      #
# SOURCE CODE:                                                         #
# https://github.com/msberends/AMR                                     #
#                                                                      #
# PLEASE CITE THIS SOFTWARE AS:                                        #
# Berends MS, Luz CF, Friedrich AW, Sinha BNM, Albers CJ, Glasner C    #
# (2022). AMR: An R Package for Working with Antimicrobial Resistance  #
# Data. Journal of Statistical Software, 104(3), 1-31.                 #
# https://doi.org/10.18637/jss.v104.i03                                #
#                                                                      #
# Developed at the University of Groningen and the University Medical  #
# Center Groningen in The Netherlands, in collaboration with many      #
# colleagues from around the world, see our website.                   #
#                                                                      #
# This R package is free software; you can freely use and distribute   #
# it for both personal and commercial purposes under the terms of the  #
# GNU General Public License version 2.0 (GNU GPL-2), as published by  #
# the Free Software Foundation.                                        #
# We created this package for both routine data analysis and academic  #
# research and it was publicly released in the hope that it will be    #
# useful, but it comes WITHOUT ANY WARRANTY OR LIABILITY.              #
#                                                                      #
# Visit our website for the full manual and a complete tutorial about  #
# how to conduct AMR data analysis: https://msberends.github.io/AMR/   #
# ==================================================================== #
#!/bin/bash

#######################################
# This script runs on commit-msg hook #
#######################################

# Path to the commit message file
COMMIT_MSG_FILE=$1

# Read the current commit message
COMMIT_MSG=$(cat "$COMMIT_MSG_FILE")
# check the commit message, cancel commit if needed
if [[ "$COMMIT_MSG" =~ \(no-check\)|\(no-checks\)|\(no-verify\) ]]; then
  exit 0
fi

# Path to the DESCRIPTION file
DESCRIPTION_FILE="DESCRIPTION"
# Read the version number from the DESCRIPTION file
if [ -f "$DESCRIPTION_FILE" ]; then
  currentversion=$(grep "^Version:" "$DESCRIPTION_FILE" | awk '{print $2}')
else
  echo "Error: DESCRIPTION file not found. Unable to prepend version number."
  exit 1
fi

# Prepend the version number to the commit message
echo "(v${currentversion}) ${COMMIT_MSG}" > "$COMMIT_MSG_FILE"

# Print the updated commit message for verification
echo "Updated commit message: $(cat "$COMMIT_MSG_FILE")"