Translation table for microorganism codes
microorganisms.codes.RdA data set containing commonly used codes for microorganisms. Define your own with set_mo_source.
microorganisms.codes
Format
A data.frame with 3,303 observations and 2 variables:
certeCommonly used code of a microorganism
moCode of microorganism in
microorganisms
Read more on our website!
On our website https://msberends.gitlab.io/AMR you can find a comprehensive tutorial about how to conduct AMR analysis, the complete documentation of all functions (which reads a lot easier than here in R) and an example analysis using WHONET data.