# ==================================================================== #
# TITLE                                                                #
# Antimicrobial Resistance (AMR) Analysis                              #
#                                                                      #
# SOURCE                                                               #
# https://gitlab.com/msberends/AMR                                     #
#                                                                      #
# LICENCE                                                              #
# (c) 2019 Berends MS (m.s.berends@umcg.nl), Luz CF (c.f.luz@umcg.nl)  #
#                                                                      #
# This R package is free software; you can freely use and distribute   #
# it for both personal and commercial purposes under the terms of the  #
# GNU General Public License version 2.0 (GNU GPL-2), as published by  #
# the Free Software Foundation.                                        #
#                                                                      #
# This R package was created for academic research and was publicly    #
# released in the hope that it will be useful, but it comes WITHOUT    #
# ANY WARRANTY OR LIABILITY.                                           #
# Visit our website for more info: https://msberends.gitlab.io/AMR.    #
# ==================================================================== #

context("abname.R")

test_that("abname works", {
  expect_equal(abname("AMOX"), "Amoxicillin")
  expect_equal(abname(c("AMOX", "GENT")), c("Amoxicillin", "Gentamicin"))
  expect_equal(abname(c("AMOX+GENT")), "Amoxicillin + gentamicin")
  expect_equal(abname("AMOX", from = 'umcg'), "Amoxicillin")
  expect_equal(abname("amox", from = 'certe', tolower = TRUE), "amoxicillin")
  expect_equal(abname("J01CA04", from = 'atc'), "Amoxicillin")
  expect_equal(abname(c("amox", "J01CA04", "Trimox", "dispermox", "Amoxil")),
                      rep("Amoxicillin", 5))
  expect_equal(abname("AMOX", to = 'atc'), "J01CA04")

  expect_error(abname("AMOX", to = c(1:3)))
  expect_error(abname("AMOX", to = "test"))
  expect_warning(abname("NOTEXISTING
       "))
  expect_warning(abname("AMOX or GENT"))

  # this one is being found with as.atc internally
  expect_equal(abname("flu_clox123"), "Flucloxacillin")
})