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049baf0a71d27259fa9718c7fe109ffb9757003a
AMR/man
History
dr. M.S. (Matthijs) Berends 049baf0a71 fix for antibiograms on R < 3.5
2023-02-24 09:43:10 +01:00
..
figures
website update
2022-12-11 11:44:29 +01:00
ab_from_text.Rd
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
ab_property.Rd
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
add_custom_antimicrobials.Rd
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
add_custom_microorganisms.Rd
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
age_groups.Rd
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
age.Rd
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
AMR-deprecated.Rd
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
AMR-options.Rd
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
AMR.Rd
bring back antibiogram(), without deps
2023-02-10 16:18:00 +01:00
antibiogram.Rd
fix for antibiograms on R < 3.5
2023-02-24 09:43:10 +01:00
antibiotic_class_selectors.Rd
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
antibiotics.Rd
documentation, unit tests
2023-01-24 10:20:27 +01:00
as.ab.Rd
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
as.av.Rd
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
as.disk.Rd
documentation, unit tests
2023-01-24 10:20:27 +01:00
as.mic.Rd
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
as.mo.Rd
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
as.sir.Rd
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
atc_online.Rd
documentation, unit tests
2023-01-24 10:20:27 +01:00
av_from_text.Rd
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
av_property.Rd
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
availability.Rd
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
bug_drug_combinations.Rd
fix for antibiograms on R < 3.5
2023-02-24 09:43:10 +01:00
clinical_breakpoints.Rd
bring back antibiogram(), without deps
2023-02-10 16:18:00 +01:00
count.Rd
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
custom_eucast_rules.Rd
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
dosage.Rd
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
eucast_rules.Rd
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
example_isolates_unclean.Rd
bring back antibiogram(), without deps
2023-02-10 16:18:00 +01:00
example_isolates.Rd
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
first_isolate.Rd
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
g.test.Rd
documentation, unit tests
2023-01-24 10:20:27 +01:00
get_episode.Rd
unit tests
2023-02-12 17:10:48 +01:00
ggplot_pca.Rd
documentation, unit tests
2023-01-24 10:20:27 +01:00
ggplot_sir.Rd
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
guess_ab_col.Rd
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
intrinsic_resistant.Rd
bring back antibiogram(), without deps
2023-02-10 16:18:00 +01:00
italicise_taxonomy.Rd
documentation, unit tests
2023-01-24 10:20:27 +01:00
join.Rd
documentation, unit tests
2023-01-24 10:20:27 +01:00
key_antimicrobials.Rd
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
kurtosis.Rd
documentation, unit tests
2023-01-24 10:20:27 +01:00
like.Rd
documentation, unit tests
2023-01-24 10:20:27 +01:00
mdro.Rd
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
mean_amr_distance.Rd
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
microorganisms.codes.Rd
bring back antibiogram(), without deps
2023-02-10 16:18:00 +01:00
microorganisms.Rd
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
mo_matching_score.Rd
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
mo_property.Rd
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
mo_source.Rd
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
pca.Rd
documentation, unit tests
2023-01-24 10:20:27 +01:00
plot.Rd
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
proportion.Rd
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
random.Rd
documentation, unit tests
2023-01-24 10:20:27 +01:00
resistance_predict.Rd
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
skewness.Rd
documentation, unit tests
2023-01-24 10:20:27 +01:00
translate.Rd
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
WHOCC.Rd
documentation, unit tests
2023-01-24 10:20:27 +01:00
WHONET.Rd
fix for antibiogram(), transform WHONET data set to sir
2023-02-22 15:40:05 +01:00