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70 lines
5.1 KiB
R
70 lines
5.1 KiB
R
# ==================================================================== #
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# TITLE: #
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# AMR: An R Package for Working with Antimicrobial Resistance Data #
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# #
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# SOURCE CODE: #
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# https://github.com/msberends/AMR #
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# #
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# PLEASE CITE THIS SOFTWARE AS: #
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# Berends MS, Luz CF, Friedrich AW, et al. (2022). #
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# AMR: An R Package for Working with Antimicrobial Resistance Data. #
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# Journal of Statistical Software, 104(3), 1-31. #
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# https://doi.org/10.18637/jss.v104.i03 #
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# #
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# Developed at the University of Groningen and the University Medical #
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# Center Groningen in the Netherlands, in collaboration with many #
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# colleagues from around the world, see our website. #
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# #
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# This R package is free software; you can freely use and distribute #
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# it for both personal and commercial purposes under the terms of the #
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# GNU General Public License version 2.0 (GNU GPL-2), as published by #
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# the Free Software Foundation. #
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# We created this package for both routine data analysis and academic #
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# research and it was publicly released in the hope that it will be #
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# useful, but it comes WITHOUT ANY WARRANTY OR LIABILITY. #
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# #
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# Visit our website for the full manual and a complete tutorial about #
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# how to conduct AMR data analysis: https://amr-for-r.org #
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# ==================================================================== #
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test_that("test-translate.R", {
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skip_on_cran()
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expect_identical(mo_genus("B_GRAMP", language = "pt"), "(gênero desconhecido)")
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expect_identical(mo_fullname("CoNS", "cs"), "Koaguláza-negativní stafylokok (KNS)")
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expect_identical(mo_fullname("CoNS", "da"), "Koagulase-negative stafylokokker (KNS)")
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expect_identical(mo_fullname("CoNS", "de"), "Koagulase-negative Staphylococcus (KNS)")
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expect_identical(mo_fullname("CoNS", "el"), "Σταφυλόκοκκος με αρνητική πηκτικότητα (CoNS)")
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expect_identical(mo_fullname("CoNS", "en"), "Coagulase-negative Staphylococcus (CoNS)")
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expect_identical(mo_fullname("CoNS", "es"), "Staphylococcus coagulasa negativo (SCN)")
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expect_identical(mo_fullname("CoNS", "fi"), "Koagulaasinegatiivinen stafylokokki (KNS)")
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expect_identical(mo_fullname("CoNS", "fr"), "Staphylocoque à coagulase négative (CoNS)")
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expect_identical(mo_fullname("CoNS", "it"), "Stafilococco coagulasi-negativo (CoNS)")
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expect_identical(mo_fullname("CoNS", "ja"), "コアグラーゼ陰性ブドウ球菌 (グラム陰性)")
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expect_identical(mo_fullname("CoNS", "nl"), "Coagulase-negatieve Staphylococcus (CNS)")
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expect_identical(mo_fullname("CoNS", "no"), "Koagulase-negative stafylokokker (KNS)")
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expect_identical(mo_fullname("CoNS", "pl"), "Staphylococcus koagulazoujemny (CoNS)")
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expect_identical(mo_fullname("CoNS", "pt"), "Staphylococcus coagulase negativo (CoNS)")
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expect_identical(mo_fullname("CoNS", "ro"), "Stafilococ coagulazo-negativ (SCN)")
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expect_identical(mo_fullname("CoNS", "ru"), "Коагулазоотрицательный стафилококк (КОС)")
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expect_identical(mo_fullname("CoNS", "sv"), "Koagulasnegativa stafylokocker (KNS)")
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expect_identical(mo_fullname("CoNS", "tr"), "Koagülaz-negatif Stafilokok (KNS)")
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expect_identical(mo_fullname("CoNS", "uk"), "Коагулазонегативний стафілокок (КНС)")
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expect_identical(mo_fullname("CoNS", "zh"), "凝固酶阴性葡萄球菌 (CoNS)")
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expect_error(mo_fullname("CoNS", "aa"))
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# a translation is never translated again, such as "Ticarcillin" to "Ticarcilline" and then to "Ticarcillinee"
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expect_identical(ab_name("TCC", language = "nl"), "Ticarcilline/clavulaanzuur")
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expect_identical(ab_name("TCC", language = "fr"), "Ticarcilline/acide clavulanique")
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expect_identical(ab_name(c("RIF", "PEN"), language = "it"), c("Rifampicina", "Benzilpenicillina"))
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expect_identical(ab_name("AKF", language = "nl"), "Amikacine/fosfomycin")
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expect_identical(AMR:::translate_into_language(c("Syndromic Group", "Streptococcus Group A", "Salmonella group B", "biogroup 1"), language = "fr"), c("Groupe syndromique", "Streptococcus Groupe A", "Salmonella groupe B", "biogroupe 1"))
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expect_identical(mo_name(c("B_STRPT_GRPA", "B_SLMNL_GRPB"), language = "fr"), c("Streptococcus groupe A", "Salmonella groupe B"))
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for (lang in setdiff(AMR:::LANGUAGES_SUPPORTED, "en")) {
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translated <- AMR:::translate_into_language(AMR::antimicrobials$name, language = lang, only_affect_ab_names = TRUE)
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expect_false(any(translated %like_case% "(cillinee|mycinee|cinaa|cillinaa)"), info = lang)
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}
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})
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