.. |
aa_amr-package.R
|
(v2.1.1.9081) HUGE microorganisms update for fungi!
|
2024-09-29 22:17:56 +02:00 |
aa_globals.R
|
(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
|
2024-07-16 14:53:17 +02:00 |
aa_helper_functions.R
|
(v2.1.1.9082) algorithm updates
|
2024-09-30 18:46:55 +02:00 |
aa_helper_pm_functions.R
|
(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
|
2024-07-16 14:53:17 +02:00 |
aa_options.R
|
(v2.1.1.9078) 12 new formatting formats for antibiogram() , prepare for Bayesian WISCA
|
2024-09-22 11:45:51 +02:00 |
ab_from_text.R
|
(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
|
2024-07-16 14:53:17 +02:00 |
ab_property.R
|
(v2.1.1.9079) fix for uti in as.sir()
|
2024-09-24 15:34:12 +02:00 |
ab_selectors.R
|
(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
|
2024-07-16 14:53:17 +02:00 |
ab.R
|
(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
|
2024-07-16 14:53:17 +02:00 |
age.R
|
(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
|
2024-07-16 14:53:17 +02:00 |
antibiogram.R
|
(v2.1.1.9081) HUGE microorganisms update for fungi!
|
2024-09-29 22:17:56 +02:00 |
atc_online.R
|
(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
|
2024-07-16 14:53:17 +02:00 |
av_from_text.R
|
(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
|
2024-07-16 14:53:17 +02:00 |
av_property.R
|
(v2.1.1.9079) fix for uti in as.sir()
|
2024-09-24 15:34:12 +02:00 |
av.R
|
(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
|
2024-07-16 14:53:17 +02:00 |
availability.R
|
(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
|
2024-07-16 14:53:17 +02:00 |
bug_drug_combinations.R
|
(v2.1.1.9081) HUGE microorganisms update for fungi!
|
2024-09-29 22:17:56 +02:00 |
count.R
|
(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
|
2024-07-16 14:53:17 +02:00 |
custom_antimicrobials.R
|
(v2.1.1.9079) fix for uti in as.sir()
|
2024-09-24 15:34:12 +02:00 |
custom_eucast_rules.R
|
(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
|
2024-07-16 14:53:17 +02:00 |
custom_microorganisms.R
|
(v2.1.1.9079) fix for uti in as.sir()
|
2024-09-24 15:34:12 +02:00 |
data.R
|
(v2.1.1.9081) HUGE microorganisms update for fungi!
|
2024-09-29 22:17:56 +02:00 |
disk.R
|
(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
|
2024-07-16 14:53:17 +02:00 |
eucast_rules.R
|
(v2.1.1.9079) fix for uti in as.sir()
|
2024-09-24 15:34:12 +02:00 |
export_biosample.R
|
(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
|
2024-07-16 14:53:17 +02:00 |
first_isolate.R
|
(v2.1.1.9083) update for first_isolate()
|
2024-09-30 19:13:53 +02:00 |
g.test.R
|
(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
|
2024-07-16 14:53:17 +02:00 |
get_episode.R
|
(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
|
2024-07-16 14:53:17 +02:00 |
ggplot_pca.R
|
(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
|
2024-07-16 14:53:17 +02:00 |
ggplot_sir.R
|
(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
|
2024-07-16 14:53:17 +02:00 |
guess_ab_col.R
|
(v2.1.1.9071) update veterinary SIR interpretation, add only_fungi
|
2024-09-19 11:44:56 +02:00 |
italicise_taxonomy.R
|
(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
|
2024-07-16 14:53:17 +02:00 |
join_microorganisms.R
|
(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
|
2024-07-16 14:53:17 +02:00 |
key_antimicrobials.R
|
(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
|
2024-07-16 14:53:17 +02:00 |
kurtosis.R
|
(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
|
2024-07-16 14:53:17 +02:00 |
like.R
|
(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
|
2024-07-16 14:53:17 +02:00 |
mdro.R
|
(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
|
2024-07-16 14:53:17 +02:00 |
mean_amr_distance.R
|
(v2.1.1.9081) HUGE microorganisms update for fungi!
|
2024-09-29 22:17:56 +02:00 |
mic.R
|
(v2.1.1.9080) fix rescale_mic() for an outside MIC range
|
2024-09-24 22:39:40 +02:00 |
mo_matching_score.R
|
(v2.1.1.9082) algorithm updates
|
2024-09-30 18:46:55 +02:00 |
mo_property.R
|
(v2.1.1.9082) algorithm updates
|
2024-09-30 18:46:55 +02:00 |
mo_source.R
|
(v2.1.1.9079) fix for uti in as.sir()
|
2024-09-24 15:34:12 +02:00 |
mo.R
|
(v2.1.1.9082) algorithm updates
|
2024-09-30 18:46:55 +02:00 |
pca.R
|
(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
|
2024-07-16 14:53:17 +02:00 |
plotting.R
|
(v2.1.1.9080) fix rescale_mic() for an outside MIC range
|
2024-09-24 22:39:40 +02:00 |
proportion.R
|
(v2.1.1.9081) HUGE microorganisms update for fungi!
|
2024-09-29 22:17:56 +02:00 |
random.R
|
(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
|
2024-07-16 14:53:17 +02:00 |
resistance_predict.R
|
(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
|
2024-07-16 14:53:17 +02:00 |
sir_calc.R
|
(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
|
2024-07-16 14:53:17 +02:00 |
sir_df.R
|
(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
|
2024-07-16 14:53:17 +02:00 |
sir.R
|
(v2.1.1.9080) fix rescale_mic() for an outside MIC range
|
2024-09-24 22:39:40 +02:00 |
skewness.R
|
(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
|
2024-07-16 14:53:17 +02:00 |
sysdata.rda
|
(v2.1.1.9089) website update
|
2024-10-04 15:44:05 +02:00 |
translate.R
|
(v2.1.1.9079) fix for uti in as.sir()
|
2024-09-24 15:34:12 +02:00 |
vctrs.R
|
(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
|
2024-07-16 14:53:17 +02:00 |
whocc.R
|
(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
|
2024-07-16 14:53:17 +02:00 |
zz_deprecated.R
|
(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
|
2024-07-16 14:53:17 +02:00 |
zzz.R
|
(v2.1.1.9073) unit tests
|
2024-09-19 13:57:36 +02:00 |