AMR/data-raw
dr. M.S. (Matthijs) Berends 152db9d1b5 (v1.8.1.9002) fix for table() on MICs 2022-05-09 17:08:40 +02:00
..
AMR_intro.ai (v1.7.1.9068) new logo, unit tests 2021-12-12 11:07:02 +01:00
AMR_latest.tar.gz (v1.8.1.9002) fix for table() on MICs 2022-05-09 17:08:40 +02:00
Dosages_v_11.0_Breakpoint_Tables.xlsx (v.1.5.0.9000) implementation of EUCAST rules v11 (2021) 2021-01-12 22:08:04 +01:00
Intrinsic_Resistance_and_Unusual_Phenotypes_Tables_v3.3_20211018.pdf (v1.7.1.9054) mdro() update - fixes #49, first_isolate() speedup 2021-11-28 23:01:26 +01:00
Loinc.csv (v0.9.0.9012) Support for LOINC codes 2020-01-26 20:20:00 +01:00
SNOMED_PHVS_Microorganism_CDC_V12.txt (v1.5.0.9041) SNOMED update 2021-03-11 21:42:30 +01:00
_install_deps.R (v1.8.0) prerelease 1.8.0 2021-12-23 18:56:28 +01:00
_internals.R (v1.8.1) prerelease 1.8.1 2022-03-14 16:36:10 +01:00
ab.md5 (v1.7.1.9070) Better WHONET support 2021-12-13 10:18:28 +01:00
antibiotics.dta (v1.7.1.9070) Better WHONET support 2021-12-13 10:18:28 +01:00
antibiotics.rds (v1.7.1.9070) Better WHONET support 2021-12-13 10:18:28 +01:00
antibiotics.sas (v1.7.1.9070) Better WHONET support 2021-12-13 10:18:28 +01:00
antibiotics.sav (v1.7.1.9070) Better WHONET support 2021-12-13 10:18:28 +01:00
antibiotics.txt (v1.7.1.9070) Better WHONET support 2021-12-13 10:18:28 +01:00
antibiotics.xlsx (v1.7.1.9007) Updated antibiotics dataset, fixes #41 2021-06-23 10:03:17 +02:00
antivirals.dta (v1.3.0.9017) small fix 2020-09-12 13:54:21 +02:00
antivirals.rds (v1.3.0.9012) data sets vignette update 2020-08-29 21:41:46 +02:00
antivirals.sas (v1.3.0.9017) small fix 2020-09-12 13:54:21 +02:00
antivirals.sav (v1.3.0.9017) small fix 2020-09-12 13:54:21 +02:00
antivirals.txt (v1.3.0.9012) data sets vignette update 2020-08-29 21:41:46 +02:00
antivirals.xlsx (v1.3.0.9017) small fix 2020-09-12 13:54:21 +02:00
av.md5 (v1.3.0.9018) language corrections 2020-09-14 12:21:23 +02:00
create_survey_page.R (v1.2.0.9037) survey on website 2020-07-28 18:39:57 +02:00
data_dsmz.rds (v1.1.0.9020) updated taxonomy 2020-05-27 16:37:49 +02:00
dosage.dta (v1.5.0.9011) small dosage update 2021-01-24 23:27:11 +01:00
dosage.md5 (v1.5.0.9011) small dosage update 2021-01-24 23:27:11 +01:00
dosage.rds (v1.5.0.9011) small dosage update 2021-01-24 23:27:11 +01:00
dosage.sas (v1.5.0.9011) small dosage update 2021-01-24 23:27:11 +01:00
dosage.sav (v1.5.0.9011) small dosage update 2021-01-24 23:27:11 +01:00
dosage.txt (v1.5.0.9011) small dosage update 2021-01-24 23:27:11 +01:00
dosage.xlsx (v1.5.0.9011) small dosage update 2021-01-24 23:27:11 +01:00
download_buttons.psd (v1.3.0.9012) data sets vignette update 2020-08-29 21:41:46 +02:00
download_dta.png (v1.3.0.9012) data sets vignette update 2020-08-29 21:41:46 +02:00
download_r.png (v1.3.0.9012) data sets vignette update 2020-08-29 21:41:46 +02:00
download_sas.png (v1.3.0.9012) data sets vignette update 2020-08-29 21:41:46 +02:00
download_sav.png (v1.3.0.9012) data sets vignette update 2020-08-29 21:41:46 +02:00
download_txt.png (v1.3.0.9012) data sets vignette update 2020-08-29 21:41:46 +02:00
download_xlsx.png (v1.3.0.9012) data sets vignette update 2020-08-29 21:41:46 +02:00
eucast_rules.tsv (v1.7.1.9055) added EUCAST 3.3 and all LPSN records numbers 2021-11-29 10:38:38 +01:00
ex2.R (v1.7.1.9054) mdro() update - fixes #49, first_isolate() speedup 2021-11-28 23:01:26 +01:00
ex2.rds (v1.7.1.9054) mdro() update - fixes #49, first_isolate() speedup 2021-11-28 23:01:26 +01:00
example_isolates.rds (v1.7.1.9016) only_treatable ab selectors 2021-07-08 22:23:28 +02:00
exploratory_data_analysis_test.R (v1.7.1.9002) ab class selectors update 2021-06-14 22:04:04 +02:00
github_preview.png (v1.2.0.9026) move to github 2020-07-08 14:48:06 +02:00
github_preview.psd (v1.2.0.9026) move to github 2020-07-08 14:48:06 +02:00
intrinsicR.md5 (v1.7.1.9073) as.rsi() fix for UTIs 2021-12-14 21:47:14 +01:00
intrinsic_resistant.dta (v1.7.1.9073) as.rsi() fix for UTIs 2021-12-14 21:47:14 +01:00
intrinsic_resistant.md5 (v1.7.1.9064) eucast 3.3 for mdro(), major change to repeated calling 2021-12-11 13:41:31 +01:00
intrinsic_resistant.rds (v1.7.1.9073) as.rsi() fix for UTIs 2021-12-14 21:47:14 +01:00
intrinsic_resistant.sas (v1.7.1.9073) as.rsi() fix for UTIs 2021-12-14 21:47:14 +01:00
intrinsic_resistant.sav (v1.7.1.9073) as.rsi() fix for UTIs 2021-12-14 21:47:14 +01:00
intrinsic_resistant.txt (v1.7.1.9073) as.rsi() fix for UTIs 2021-12-14 21:47:14 +01:00
intrinsic_resistant.xlsx (v1.5.0.9028) Updated taxonomy until March 2021 2021-03-04 23:28:32 +01:00
logo.svg (v1.7.1.9068) new logo, unit tests 2021-12-12 11:07:02 +01:00
loinc.R (v1.8.0) prerelease 1.8.0 2021-12-23 18:56:28 +01:00
microorganisms.dta (v1.7.1.9056) unit tests 2021-11-29 11:55:18 +01:00
microorganisms.old.dta (v1.7.1.9051) updated taxonomy, updated git branch name 2021-10-06 13:23:57 +02:00
microorganisms.old.md5 (v1.7.1.9051) updated taxonomy, updated git branch name 2021-10-06 13:23:57 +02:00
microorganisms.old.rds (v1.7.1.9051) updated taxonomy, updated git branch name 2021-10-06 13:23:57 +02:00
microorganisms.old.sas (v1.7.1.9051) updated taxonomy, updated git branch name 2021-10-06 13:23:57 +02:00
microorganisms.old.sav (v1.7.1.9051) updated taxonomy, updated git branch name 2021-10-06 13:23:57 +02:00
microorganisms.old.txt (v1.7.1.9051) updated taxonomy, updated git branch name 2021-10-06 13:23:57 +02:00
microorganisms.old.xlsx (v1.5.0.9028) Updated taxonomy until March 2021 2021-03-04 23:28:32 +01:00
microorganisms.rds (v1.7.1.9056) unit tests 2021-11-29 11:55:18 +01:00
microorganisms.sas (v1.7.1.9056) unit tests 2021-11-29 11:55:18 +01:00
microorganisms.sav (v1.7.1.9056) unit tests 2021-11-29 11:55:18 +01:00
microorganisms.translation.rds (v1.5.0.9030) as.ab() speed improvement 2021-03-05 10:32:09 +01:00
microorganisms.txt (v1.7.1.9056) unit tests 2021-11-29 11:55:18 +01:00
microorganisms.xlsx (v1.5.0.9041) SNOMED update 2021-03-11 21:42:30 +01:00
mo.md5 (v1.7.1.9056) unit tests 2021-11-29 11:55:18 +01:00
poorman_prepend.R (v1.8.0) prerelease 1.8.0 2021-12-23 18:56:28 +01:00
read_EUCAST.R (v1.8.0) prerelease 1.8.0 2021-12-23 18:56:28 +01:00
reproduction_of_antibiotics.R (v1.8.0) prerelease 1.8.0 2021-12-23 18:56:28 +01:00
reproduction_of_antivirals.R (v1.8.0) prerelease 1.8.0 2021-12-23 18:56:28 +01:00
reproduction_of_dosage.R (v1.8.0) prerelease 1.8.0 2021-12-23 18:56:28 +01:00
reproduction_of_example_isolates_unclean.R (v1.8.0) prerelease 1.8.0 2021-12-23 18:56:28 +01:00
reproduction_of_intrinsic_resistant.R (v1.8.0) prerelease 1.8.0 2021-12-23 18:56:28 +01:00
reproduction_of_microorganisms.R (v1.8.0.9001) as.mo improvement, fixes #52 2022-02-26 21:58:23 +01:00
reproduction_of_microorganisms_update.R (v1.8.0) prerelease 1.8.0 2021-12-23 18:56:28 +01:00
reproduction_of_poorman.R (v1.7.1.9060) bugfix set_ab_names 2021-12-05 23:11:10 +01:00
reproduction_of_rsi_translation.R (v1.8.0) prerelease 1.8.0 2021-12-23 18:56:28 +01:00
rsi.md5 (v1.7.1.9074) as.mo() improvement, ASCII replacements for unit tests 2021-12-14 22:39:23 +01:00
rsi_translation.dta (v1.7.1.9074) as.mo() improvement, ASCII replacements for unit tests 2021-12-14 22:39:23 +01:00
rsi_translation.rds (v1.7.1.9074) as.mo() improvement, ASCII replacements for unit tests 2021-12-14 22:39:23 +01:00
rsi_translation.sas (v1.7.1.9074) as.mo() improvement, ASCII replacements for unit tests 2021-12-14 22:39:23 +01:00
rsi_translation.sav (v1.7.1.9074) as.mo() improvement, ASCII replacements for unit tests 2021-12-14 22:39:23 +01:00
rsi_translation.txt (v1.7.1.9074) as.mo() improvement, ASCII replacements for unit tests 2021-12-14 22:39:23 +01:00
rsi_translation.xlsx (v1.7.0.9002) old MO codes 2021-06-01 16:36:33 +02:00
snomed.R (v1.8.0) prerelease 1.8.0 2021-12-23 18:56:28 +01:00
tinytest_1.2.4.10.tar.gz (v1.6.0.9063) prepare new release 2021-05-24 09:00:11 +02:00
tinytest_1.3.1.tar.gz (v1.7.1.9033) dplyr grouping fix on windows? 2021-08-30 15:01:32 +02:00
translations.tsv (v1.7.1.9070) Better WHONET support 2021-12-13 10:18:28 +01:00
v_10.0_Breakpoint_Tables.xlsx (v0.9.0.9022) inheritance fix 2020-02-10 14:18:15 +01:00
v_11.0_Breakpoint_Tables.xlsx (v.1.5.0.9000) implementation of EUCAST rules v11 (2021) 2021-01-12 22:08:04 +01:00
whonet_bugfixes.R (v1.7.1.9050) fix for as.mo 2021-10-05 14:00:35 +02:00