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<a class="navbar-link" href="index.html">AMR (for R)</a>
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<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">1.7.1.9058</span>
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<a href="articles/AMR.html">
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Conduct AMR analysis
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<a href="articles/resistance_predict.html">
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Predict antimicrobial resistance
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Conduct principal component analysis for AMR
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Determine multi-drug resistance (MDR)
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Work with WHONET data
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Import data from SPSS/SAS/Stata
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Apply EUCAST rules
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Get properties of a microorganism
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Get properties of an antibiotic
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Other: benchmarks
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Manual
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Authors
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Source Code
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<div class="contents col-md-9">
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<div class="section level2 authors-section">
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<div class="page-header">
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<h1>Authors</h1>
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</div>
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<ul class="list-unstyled"><li>
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<p><strong><a href="https://www.rug.nl/staff/m.s.berends/" class="external-link">Matthijs S. Berends</a></strong>. Author, maintainer. <a href="https://orcid.org/0000-0001-7620-1800" target="orcid.widget" aria-label="ORCID" class="external-link"><span class="fab fa-orcid orcid" aria-hidden="true"></span></a>
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</p>
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</li>
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<li>
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<p><strong>Christian F. Luz</strong>. Author, contributor. <a href="https://orcid.org/0000-0001-5809-5995" target="orcid.widget" aria-label="ORCID" class="external-link"><span class="fab fa-orcid orcid" aria-hidden="true"></span></a>
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</p>
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</li>
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<li>
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<p><strong>Dennis Souverein</strong>. Author, contributor. <a href="https://orcid.org/0000-0003-0455-0336" target="orcid.widget" aria-label="ORCID" class="external-link"><span class="fab fa-orcid orcid" aria-hidden="true"></span></a>
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</p>
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</li>
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<li>
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<p><strong>Erwin E. A. Hassing</strong>. Author, contributor.
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</p>
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</li>
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<li>
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<p><strong>Casper J. Albers</strong>. Thesis advisor. <a href="https://orcid.org/0000-0002-9213-6743" target="orcid.widget" aria-label="ORCID" class="external-link"><span class="fab fa-orcid orcid" aria-hidden="true"></span></a>
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</p>
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</li>
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<li>
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<p><strong>Judith M. Fonville</strong>. Contributor.
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</p>
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</li>
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<li>
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<p><strong>Alex W. Friedrich</strong>. Thesis advisor. <a href="https://orcid.org/0000-0003-4881-038X" target="orcid.widget" aria-label="ORCID" class="external-link"><span class="fab fa-orcid orcid" aria-hidden="true"></span></a>
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</p>
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</li>
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<li>
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<p><strong>Corinna Glasner</strong>. Thesis advisor. <a href="https://orcid.org/0000-0003-1241-1328" target="orcid.widget" aria-label="ORCID" class="external-link"><span class="fab fa-orcid orcid" aria-hidden="true"></span></a>
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</p>
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</li>
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<li>
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<p><strong>Eric H. L. C. M. Hazenberg</strong>. Contributor.
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</p>
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</li>
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<li>
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<p><strong>Gwen Knight</strong>. Contributor. <a href="https://orcid.org/0000-0002-7263-9896" target="orcid.widget" aria-label="ORCID" class="external-link"><span class="fab fa-orcid orcid" aria-hidden="true"></span></a>
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</p>
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</li>
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<li>
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<p><strong>Annick Lenglet</strong>. Contributor. <a href="https://orcid.org/0000-0003-2013-8405" target="orcid.widget" aria-label="ORCID" class="external-link"><span class="fab fa-orcid orcid" aria-hidden="true"></span></a>
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</p>
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</li>
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<li>
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<p><strong>Bart C. Meijer</strong>. Contributor.
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</p>
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</li>
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<li>
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<p><strong>Sofia Ny</strong>. Contributor. <a href="https://orcid.org/0000-0002-2017-1363" target="orcid.widget" aria-label="ORCID" class="external-link"><span class="fab fa-orcid orcid" aria-hidden="true"></span></a>
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</p>
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</li>
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<li>
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<p><strong>Rogier P. Schade</strong>. Contributor.
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</p>
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</li>
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<li>
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<p><strong>Bhanu N. M. Sinha</strong>. Thesis advisor. <a href="https://orcid.org/0000-0003-1634-0010" target="orcid.widget" aria-label="ORCID" class="external-link"><span class="fab fa-orcid orcid" aria-hidden="true"></span></a>
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</p>
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</li>
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<li>
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<p><strong>Anthony Underwood</strong>. Contributor. <a href="https://orcid.org/0000-0002-8547-427" target="orcid.widget" aria-label="ORCID" class="external-link"><span class="fab fa-orcid orcid" aria-hidden="true"></span></a>
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</p>
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</li>
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</ul></div>
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<div class="section level2 citation-section">
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<div>
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<h1 id="citation">Citation</h1>
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<small class="dont-index">Source: <a href="https://github.com/msberends/AMR/blob/HEAD/inst/CITATION" class="external-link"><code>inst/CITATION</code></a></small>
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</div>
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</div>
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<p>Berends MS, Luz CF, Friedrich AW, Sinha BNM, Albers CJ, Glasner C (2021). AMR - An R Package for Working with
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Antimicrobial Resistance Data. Journal of Statistical Software (accepted for publication), https://www.biorxiv.org/content/10.1101/810622, doi: 10.1101/810622.</p>
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<pre>@Article{,
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title = {AMR - An R Package for Working with Antimicrobial Resistance Data},
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author = {M S Berends and C F Luz and A W Friedrich and B N M Sinha and C J Albers and C Glasner},
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doi = {10.1101/810622},
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journal = {Journal of Statistical Software},
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pages = {Accepted for publication},
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year = {2021},
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url = {https://www.biorxiv.org/content/10.1101/810622},
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}</pre>
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<p>Berends, MS (2021). A New Instrument for Microbial Epidemiology: Empowering Antimicrobial Resistance Data Analysis (PhD thesis). University of Groningen, doi: 10.33612/diss.177417131.</p>
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<pre>@PhdThesis{,
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title = {A New Instrument for Microbial Epidemiology: Empowering Antimicrobial Resistance Data Analysis},
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author = {M S Berends},
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publisher = {University of Groningen},
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school = {University of Groningen},
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doi = {10.33612/diss.177417131},
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pages = {287},
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year = {2021},
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}</pre>
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<p>Luz, CF (2021). Data Science for Infection Management & Antimicrobial Stewardship (PhD thesis). University of Groningen, doi: 10.33612/diss.192486375.</p>
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<pre>@PhdThesis{,
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title = {Data Science for Infection Management & Antimicrobial Stewardship},
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author = {C F Luz},
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publisher = {University of Groningen},
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school = {University of Groningen},
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doi = {10.33612/diss.192486375},
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pages = {326},
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year = {2021},
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}</pre>
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<footer><div class="copyright">
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<p></p><p>Developed by <a href="https://www.rug.nl/staff/m.s.berends/" class="external-link">Matthijs S. Berends</a>, Christian F. Luz, Dennis Souverein, Erwin E. A. Hassing.</p>
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<p></p><p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.0.0.</p>
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