dr. M.S. (Matthijs) Berends 2c5a9bb622 new relative episode determination in get_episode(), fix for plotting disk/MIC values

2023-02-24 17:06:30 +01:00

..

figures

website update

2022-12-11 11:44:29 +01:00

ab_from_text.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

ab_property.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

add_custom_antimicrobials.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

add_custom_microorganisms.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

age_groups.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

age.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

AMR-deprecated.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

AMR-options.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

AMR.Rd

bring back antibiogram(), without deps

2023-02-10 16:18:00 +01:00

antibiogram.Rd

remove note

2023-02-24 10:31:36 +01:00

antibiotic_class_selectors.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

antibiotics.Rd

documentation, unit tests

2023-01-24 10:20:27 +01:00

as.ab.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

as.av.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

as.disk.Rd

documentation, unit tests

2023-01-24 10:20:27 +01:00

as.mic.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

as.mo.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

as.sir.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

atc_online.Rd

documentation, unit tests

2023-01-24 10:20:27 +01:00

av_from_text.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

av_property.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

availability.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

bug_drug_combinations.Rd

fix for antibiograms on R < 3.5

2023-02-24 09:43:10 +01:00

clinical_breakpoints.Rd

bring back antibiogram(), without deps

2023-02-10 16:18:00 +01:00

count.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

custom_eucast_rules.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

dosage.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

eucast_rules.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

example_isolates_unclean.Rd

bring back antibiogram(), without deps

2023-02-10 16:18:00 +01:00

example_isolates.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

first_isolate.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

g.test.Rd

documentation, unit tests

2023-01-24 10:20:27 +01:00

get_episode.Rd

new relative episode determination in get_episode(), fix for plotting disk/MIC values

2023-02-24 17:06:30 +01:00

ggplot_pca.Rd

documentation, unit tests

2023-01-24 10:20:27 +01:00

ggplot_sir.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

guess_ab_col.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

intrinsic_resistant.Rd

bring back antibiogram(), without deps

2023-02-10 16:18:00 +01:00

italicise_taxonomy.Rd

documentation, unit tests

2023-01-24 10:20:27 +01:00

join.Rd

documentation, unit tests

2023-01-24 10:20:27 +01:00

key_antimicrobials.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

kurtosis.Rd

documentation, unit tests

2023-01-24 10:20:27 +01:00

like.Rd

documentation, unit tests

2023-01-24 10:20:27 +01:00

mdro.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

mean_amr_distance.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

microorganisms.codes.Rd

bring back antibiogram(), without deps

2023-02-10 16:18:00 +01:00

microorganisms.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

mo_matching_score.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

mo_property.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

mo_source.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

pca.Rd

documentation, unit tests

2023-01-24 10:20:27 +01:00

plot.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

proportion.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

random.Rd

documentation, unit tests

2023-01-24 10:20:27 +01:00

resistance_predict.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

skewness.Rd

documentation, unit tests

2023-01-24 10:20:27 +01:00

translate.Rd

make rsi work in more cases, documentation update

2023-02-22 14:38:57 +01:00

WHOCC.Rd

documentation, unit tests

2023-01-24 10:20:27 +01:00

WHONET.Rd

fix for antibiogram(), transform WHONET data set to sir

2023-02-22 15:40:05 +01:00