mirror of https://github.com/msberends/AMR.git
30 lines
1.3 KiB
R
30 lines
1.3 KiB
R
% Generated by roxygen2: do not edit by hand
|
|
% Please edit documentation in R/data.R
|
|
\docType{data}
|
|
\name{microorganisms.codes}
|
|
\alias{microorganisms.codes}
|
|
\title{Data Set with 5,411 Common Microorganism Codes}
|
|
\format{
|
|
A \link[tibble:tibble]{tibble} with 5,411 observations and 2 variables:
|
|
\itemize{
|
|
\item \code{code}\cr Commonly used code of a microorganism
|
|
\item \code{mo}\cr ID of the microorganism in the \link{microorganisms} data set
|
|
}
|
|
}
|
|
\usage{
|
|
microorganisms.codes
|
|
}
|
|
\description{
|
|
A data set containing commonly used codes for microorganisms, from laboratory systems and WHONET. Define your own with \code{\link[=set_mo_source]{set_mo_source()}}. They will all be searched when using \code{\link[=as.mo]{as.mo()}} and consequently all the \code{\link[=mo_property]{mo_*}} functions.
|
|
}
|
|
\details{
|
|
Like all data sets in this package, this data set is publicly available for download in the following formats: R, MS Excel, Apache Feather, Apache Parquet, SPSS, SAS, and Stata. Please visit \href{https://msberends.github.io/AMR/articles/datasets.html}{our website for the download links}. The actual files are of course available on \href{https://github.com/msberends/AMR/tree/main/data-raw}{our GitHub repository}.
|
|
}
|
|
\examples{
|
|
microorganisms.codes
|
|
}
|
|
\seealso{
|
|
\code{\link[=as.mo]{as.mo()}} \link{microorganisms}
|
|
}
|
|
\keyword{datasets}
|