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AMR/man/as.mic.Rd

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761 B
R

% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/classes.R
\name{as.mic}
\alias{as.mic}
\alias{is.mic}
\title{Class 'mic'}
\usage{
as.mic(x, na.rm = FALSE)
is.mic(x)
}
\arguments{
\item{x}{vector}
\item{na.rm}{a logical indicating whether missing values should be removed}
}
\value{
New class \code{mic}
}
\description{
This transforms a vector to a new class\code{mic}, which is an ordered factor valid MIC values as levels. Invalid MIC values will be translated as \code{NA} with a warning.
}
\examples{
mic_data <- as.mic(c(">=32", "1.0", "1", "1.00", 8, "<=0.128", "8", "16", "16"))
is.mic(mic_data)
plot(mic_data)
\donttest{
library(dplyr)
tbl \%>\%
mutate_at(vars(ends_with("_mic")), as.mic)
sapply(mic_data, is.mic)
}
}