mirror of https://github.com/msberends/AMR.git
64 lines
3.2 KiB
R
64 lines
3.2 KiB
R
# ==================================================================== #
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# TITLE: #
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# AMR: An R Package for Working with Antimicrobial Resistance Data #
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# #
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# SOURCE CODE: #
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# https://github.com/msberends/AMR #
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# #
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# PLEASE CITE THIS SOFTWARE AS: #
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# Berends MS, Luz CF, Friedrich AW, Sinha BNM, Albers CJ, Glasner C #
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# (2022). AMR: An R Package for Working with Antimicrobial Resistance #
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# Data. Journal of Statistical Software, 104(3), 1-31. #
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# https://doi.org/10.18637/jss.v104.i03 #
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# #
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# Developed at the University of Groningen and the University Medical #
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# Center Groningen in The Netherlands, in collaboration with many #
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# colleagues from around the world, see our website. #
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# #
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# This R package is free software; you can freely use and distribute #
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# it for both personal and commercial purposes under the terms of the #
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# GNU General Public License version 2.0 (GNU GPL-2), as published by #
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# the Free Software Foundation. #
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# We created this package for both routine data analysis and academic #
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# research and it was publicly released in the hope that it will be #
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# useful, but it comes WITHOUT ANY WARRANTY OR LIABILITY. #
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# #
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# Visit our website for the full manual and a complete tutorial about #
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# how to conduct AMR data analysis: https://msberends.github.io/AMR/ #
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# ==================================================================== #
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expect_identical(av_name("ACI", language = NULL), "Aciclovir")
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expect_identical(av_atc("ACI"), "J05AB01")
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expect_identical(av_cid("ACI"), as.integer(135398513))
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expect_inherits(av_tradenames("ACI"), "character")
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expect_inherits(av_tradenames(c("ACI", "ACI")), "list")
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expect_identical(av_group("ACI", language = NULL),"Nucleosides and nucleotides excl. reverse transcriptase inhibitors")
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expect_identical(av_name(135398513, language = NULL), "Aciclovir")
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expect_identical(av_name("J05AB01", language = NULL), "Aciclovir")
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expect_identical(av_ddd("ACI", "oral"), 4)
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expect_identical(av_ddd_units("ACI", "iv"), "g")
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expect_identical(av_ddd("ACI", "iv"), 4)
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expect_identical(
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av_name(x = c("ACI", "VALA"), tolower = TRUE, language = NULL),
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c("aciclovir", "valaciclovir")
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)
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expect_inherits(av_info("ACI"), "list")
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expect_error(av_property("acic", "invalid property"))
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expect_error(av_name("acic", language = "INVALID"))
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expect_stdout(print(av_name("acic", language = NULL)))
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expect_equal(av_name("29113-8", language = NULL), "Abacavir")
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expect_equal(
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av_loinc("Abacavir"),
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c("29113-8", "30273-7", "30287-7", "30303-2", "78772-1", "78773-9", "79134-3", "80118-3")
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)
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expect_true(av_url("ACI") %like% "fhi[.]no")
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