mirror of https://github.com/msberends/AMR.git
48 lines
1.7 KiB
R
Executable File
48 lines
1.7 KiB
R
Executable File
context("atc.R")
|
|
|
|
test_that("atc_property works", {
|
|
expect_equal(tolower(atc_property("J01CA04", property = "Name")), "amoxicillin")
|
|
expect_equal(atc_property("J01CA04", property = "unit"), "g")
|
|
|
|
expect_equal(atc_property("J01CA04", property = "DDD"),
|
|
atc_ddd("J01CA04"))
|
|
|
|
expect_identical(atc_property("J01CA04", property = "Groups"),
|
|
atc_groups("J01CA04"))
|
|
|
|
expect_warning(atc_property("ABCDEFG", property = "DDD"))
|
|
|
|
expect_error(atc_property("J01CA04", property = c(1:5)))
|
|
expect_error(atc_property("J01CA04", property = "test"))
|
|
expect_error(atc_property("J01CA04", property = "test", administration = c(1:5)))
|
|
})
|
|
|
|
test_that("abname works", {
|
|
expect_equal(abname("AMOX"), "Amoxicillin")
|
|
expect_equal(abname(c("AMOX", "GENT")), c("Amoxicillin", "Gentamicin"))
|
|
expect_equal(abname(c("AMOX+GENT")), "Amoxicillin + gentamicin")
|
|
expect_equal(abname("AMOX", from = 'umcg'), "Amoxicillin")
|
|
expect_equal(abname("amox", from = 'molis', tolower = TRUE), "amoxicillin")
|
|
expect_equal(abname("J01CA04", from = 'atc'), "Amoxicillin")
|
|
expect_equal(abname("AMOX", to = 'atc'), "J01CA04")
|
|
expect_equal(abname("AMOX en GENT"), "Amoxicillin + gentamicin")
|
|
expect_error(abname("AMOX", to = c(1:3)))
|
|
expect_error(abname("AMOX", to = "test"))
|
|
expect_warning(abname("TEST
|
|
"))
|
|
expect_warning(abname("AMOX or GENT"))
|
|
})
|
|
|
|
test_that("guess_atc works", {
|
|
expect_equal(guess_atc(c("J01FA01",
|
|
"Erythromycin",
|
|
"eryt",
|
|
"ERYT",
|
|
"ERY",
|
|
"Erythrocin",
|
|
"Eryzole",
|
|
"Pediamycin")),
|
|
rep("J01FA01", 8))
|
|
|
|
})
|